Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 Z99496.1-201ENST00000469424 1477 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VMP1Q96GC9 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VMP1Q96GC9 RPL7P26-201ENST00000333817 754 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VMP1Q96GC9 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VMP1Q96GC9 SNORD3H-201ENST00000384486 214 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 RHEBP3-201ENST00000411920 351 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 COX6B1P7-201ENST00000430845 235 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC011742.1-201ENST00000431448 434 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 SEPT7P5-201ENST00000434048 306 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 MTND4LP10-201ENST00000435146 291 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 RABEPKP1-201ENST00000440529 1026 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 AL445669.2-201ENST00000454425 421 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 RPS29P19-201ENST00000479709 171 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC069499.1-201ENST00000489433 509 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC104629.1-201ENST00000494226 508 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 MLLT10P2-201ENST00000506434 249 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC099522.1-202ENST00000514718 367 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC105233.3-201ENST00000531125 744 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC010738.1-201ENST00000604970 987 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 SNORA51-201ENST00000606420 132 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC126544.2-201ENST00000625174 749 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 AC008013.2-202ENST00000637965 364 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 MFSD8-245ENST00000641743 948 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 BDP1P-201ENST00000582658 1990 ntBASIC3.94□□□□□ -1.78
VMP1Q96GC9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
VMP1Q96GC9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VMP1Q96GC9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VMP1Q96GC9 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 AC010733.2-201ENST00000589496 5702 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VMP1Q96GC9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VMP1Q96GC9 AL079342.2-201ENST00000403367 482 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 MTCO1P3-201ENST00000429327 192 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 AL365396.1-201ENST00000430854 671 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 AC093155.1-201ENST00000440164 826 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 BTF3P5-201ENST00000457252 467 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 RPL7P19-201ENST00000469948 618 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 AC068587.1-201ENST00000483613 781 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 RPS27AP13-201ENST00000498403 237 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 AC108941.1-201ENST00000502853 530 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 KLHL2P1-201ENST00000508691 521 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 AC105914.1-201ENST00000511798 226 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 SNORA31.8-201ENST00000516327 108 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 MIR5708-201ENST00000579723 85 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 AP003392.5-201ENST00000607857 415 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 AL390240.1-201ENST00000612950 384 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 AL731566.2-201ENST00000618971 317 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 AC095031.1-201ENST00000623685 672 ntBASIC3.93□□□□□ -1.78
VMP1Q96GC9 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VMP1Q96GC9 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VMP1Q96GC9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.93□□□□□ -1.78
VMP1Q96GC9 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VMP1Q96GC9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VMP1Q96GC9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VMP1Q96GC9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VMP1Q96GC9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VMP1Q96GC9 RNU6-707P-201ENST00000364647 95 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 AL591034.1-201ENST00000407447 340 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 RNU2-15P-201ENST00000410692 191 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 AC096533.1-201ENST00000411645 353 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 MTATP6P19-201ENST00000413797 659 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 YPEL5P1-201ENST00000419731 367 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms