Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 MIR4276-201ENST00000584832 70 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 AC083760.1-201ENST00000589621 670 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 MIR6733-201ENST00000635723 61 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 RNU6-666P-201ENST00000363499 107 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 OR52E6-202ENST00000379946 954 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 RNU6-244P-201ENST00000391028 104 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 AL031736.2-201ENST00000426573 787 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 CBX1P4-201ENST00000439415 457 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 RPS27P5-201ENST00000444247 244 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 COX6CP2-201ENST00000444980 225 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 RPL36AP33-201ENST00000450395 310 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 OR7L1P-201ENST00000456181 380 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 RN7SL499P-201ENST00000481141 276 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 ATG10-AS1-201ENST00000504846 648 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 AC023141.12-201ENST00000512399 199 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 RNU4-18P-201ENST00000516751 149 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 RN7SKP234-201ENST00000517173 224 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 RPL12P22-201ENST00000519073 490 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 HIGD1AP18-201ENST00000520730 278 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 GTF2IP8-201ENST00000560687 584 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 MIR2682-201ENST00000580305 110 ntBASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC112Q8NEF3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC112Q8NEF3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 MIR887-201ENST00000401258 79 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 SNORD88.1-201ENST00000408684 91 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 Z92545.1-201ENST00000411782 234 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 DPPA2P1-201ENST00000428060 556 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 SLC31A1P1-201ENST00000451221 567 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 RN7SL633P-201ENST00000488974 297 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 AC110792.2-201ENST00000510278 224 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 PTGES3P3-201ENST00000511479 482 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 AC007458.1-201ENST00000542812 373 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 MIR3200-201ENST00000580767 85 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 AC010928.3-201ENST00000587712 541 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 AC107871.2-201ENST00000612894 502 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 AP001002.2-201ENST00000625137 386 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 AC117529.2-201ENST00000512159 2068 ntBASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CCDC112Q8NEF3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 MIR490-201ENST00000384865 128 ntBASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 AL031121.1-201ENST00000406553 254 ntBASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 AL139281.1-201ENST00000422120 335 ntBASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 ARL5AP2-201ENST00000444698 533 ntBASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 AC069540.1-201ENST00000446320 988 ntBASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 AC115085.1-201ENST00000588924 229 ntBASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC112Q8NEF3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms