Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 AC018628.1-201ENST00000624147 3819 ntBASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PRPF38BQ5VTL8 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 AC024651.2-201ENST00000562480 2098 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 Z95327.2-201ENST00000414579 1873 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 XIAPP3-201ENST00000312918 795 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 Y_RNA.496-201ENST00000384444 101 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 CYCSP12-201ENST00000437729 300 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 AC020890.1-201ENST00000491837 504 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 AP002812.1-201ENST00000495378 474 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 RBBP4P6-201ENST00000508098 202 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 AP000827.1-201ENST00000527814 258 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 AL358913.1-201ENST00000554342 121 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 AC020634.1-201ENST00000608701 549 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 AC126915.2-201ENST00000610957 190 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 OR9K1P-202ENST00000641111 3217 ntBASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
PRPF38BQ5VTL8 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 EXOC5P1-201ENST00000510543 1969 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 RNA5SP319-201ENST00000362768 119 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 Y_RNA.645-201ENST00000391229 102 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 RPL12P17-201ENST00000432393 498 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 RPL35AP22-201ENST00000436855 335 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AC005094.1-201ENST00000440420 368 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 RPS17P13-201ENST00000448974 407 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 PCNPP5-201ENST00000452246 481 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 RPS3AP41-201ENST00000462701 778 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AC022215.1-201ENST00000481770 362 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AC116655.1-201ENST00000508324 901 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 RNU6-1332P-201ENST00000516666 104 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 snoU109.6-201ENST00000516831 118 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 RNA5SP400-201ENST00000517155 111 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AC018462.2-201ENST00000605375 395 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 MIR6864-201ENST00000617935 70 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 MIR7159-201ENST00000620587 66 ntBASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms