Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC009220.1-201ENST00000451614 275 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 HMGB1P38-201ENST00000490557 577 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 CEACAMP10-202ENST00000495431 496 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AC111000.2-201ENST00000507775 550 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 HMGN1P15-201ENST00000513870 295 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 PAICSP4-201ENST00000517543 1253 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC58Q4VC31 MIR5186-201ENST00000577504 120 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AC112230.1-201ENST00000604342 547 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AL162713.1-201ENST00000604480 262 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 HSPE1P14-201ENST00000605812 302 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AL121772.2-201ENST00000614331 297 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AC079228.1-201ENST00000624774 1049 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 RNU6-335P-201ENST00000364563 113 ntBASIC2.74□□□□□ -1.97
CCDC58Q4VC31 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 RNU6-532P-201ENST00000384318 107 ntBASIC2.74□□□□□ -1.97
CCDC58Q4VC31 AL591034.1-201ENST00000407447 340 ntBASIC2.74□□□□□ -1.97
CCDC58Q4VC31 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 AL035246.1-201ENST00000433554 1255 ntBASIC2.74□□□□□ -1.97
CCDC58Q4VC31 RPL36AP6-201ENST00000435770 321 ntBASIC2.74□□□□□ -1.97
CCDC58Q4VC31 HSPD1P21-201ENST00000436541 245 ntBASIC2.74□□□□□ -1.97
CCDC58Q4VC31 AC108734.1-201ENST00000439549 399 ntBASIC2.74□□□□□ -1.97
CCDC58Q4VC31 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 RN7SL633P-201ENST00000488974 297 ntBASIC2.74□□□□□ -1.97
CCDC58Q4VC31 AP001207.1-201ENST00000524051 481 ntBASIC2.74□□□□□ -1.97
CCDC58Q4VC31 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 OR5B10P-201ENST00000532869 642 ntBASIC2.74□□□□□ -1.97
CCDC58Q4VC31 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 AC009464.1-201ENST00000615731 469 ntBASIC2.74□□□□□ -1.97
CCDC58Q4VC31 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC58Q4VC31 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AL355379.1-201ENST00000405542 640 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 RN7SKP263-201ENST00000411194 309 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AC023347.2-201ENST00000433994 462 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AL592437.1-201ENST00000443781 492 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 NUTF2P7-201ENST00000453086 375 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AL445669.2-201ENST00000454425 421 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 PRDX3P4-201ENST00000470828 747 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AC021678.1-201ENST00000505195 936 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AC110794.1-201ENST00000505816 425 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AC004486.1-201ENST00000546846 233 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AC083760.1-201ENST00000589621 670 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 CCDC58P3-201ENST00000590792 430 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 MIR378J-201ENST00000611988 109 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 Z99129.2-201ENST00000619967 314 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AL355596.1-201ENST00000565399 3996 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AP001350.1-201ENST00000601906 1524 ntBASIC2.73□□□□□ -1.97
CCDC58Q4VC31 AL035425.3-201ENST00000564206 4996 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 AL049781.1-201ENST00000623195 3585 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 NACA3P-201ENST00000359690 648 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 RN7SKP227-201ENST00000364445 330 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 RNU6-1027P-201ENST00000383998 107 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 RPL7P25-201ENST00000404151 721 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 AC009961.3-201ENST00000449832 765 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 RPL26P28-201ENST00000451325 435 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 RN7SL385P-201ENST00000468873 276 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 RPL23AP11-201ENST00000475260 469 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms