Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 PAXBP1P1-201ENST00000449315 447 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 RPL36AP41-201ENST00000493820 306 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 RPS4XP18-201ENST00000495480 763 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC096751.1-202ENST00000502691 1067 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 RNF138P1-201ENST00000502765 546 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC108941.1-201ENST00000502853 530 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC024589.1-201ENST00000512207 263 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 RN7SKP92-201ENST00000517266 244 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AL139174.1-201ENST00000531489 886 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 LARP7P2-201ENST00000575306 125 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 RN7SL690P-201ENST00000582087 240 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AP001180.3-201ENST00000582221 145 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 BNIP3P23-201ENST00000599655 511 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 RPL23AP92-201ENST00000603609 255 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC091805.2-201ENST00000603848 235 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC107304.1-201ENST00000604229 296 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC090186.1-201ENST00000605991 572 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC093591.3-201ENST00000634516 308 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC092447.7-201ENST00000422212 1621 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 DCAF13P1-201ENST00000495256 1330 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC006378.2-201ENST00000623178 2476 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC016769.3-201ENST00000396562 315 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AL049697.2-201ENST00000403708 294 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC010975.2-201ENST00000427781 588 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 LSM1P1-201ENST00000438629 273 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC104073.1-201ENST00000451988 151 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 TPT1P7-201ENST00000458300 517 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 snoU13.1-201ENST00000459157 104 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 SRRM1P2-201ENST00000464531 1192 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC107401.1-201ENST00000503426 685 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC113430.1-201ENST00000506872 718 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC110792.2-201ENST00000510278 224 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 COX6CP8-201ENST00000522620 226 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC027807.1-201ENST00000559921 996 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 MAGOH2P-202ENST00000584384 429 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 MIR548AB-201ENST00000584917 84 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AL603839.4-201ENST00000624658 1005 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 AL391684.1-202ENST00000641293 1636 ntBASIC4.5□□□□□ -1.69
PTCHD3Q3KNS1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 MAPK10-303ENST00000641324 3959 ntBASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 Y_RNA.6-201ENST00000362350 114 ntBASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 RNY4P24-201ENST00000362735 96 ntBASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 RNU6-348P-201ENST00000384386 107 ntBASIC4.49□□□□□ -1.69
PTCHD3Q3KNS1 RPS3AP23-201ENST00000401762 784 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms