Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 HSPE1P5-201ENST00000561489 272 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SIX1Q15475 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.62□□□□□ -1.83
SIX1Q15475 AC018552.3-201ENST00000567416 561 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.62□□□□□ -1.83
SIX1Q15475 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX1Q15475 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX1Q15475 AC245389.1-201ENST00000605141 529 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 AP000238.1-201ENST00000608759 426 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 AL391261.4-201ENST00000616012 481 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 AC008147.4-201ENST00000617570 1204 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 AP000770.2-201ENST00000623694 100 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 OR1S1-201ENST00000624470 978 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.62□□□□□ -1.83
SIX1Q15475 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.62□□□□□ -1.83
SIX1Q15475 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
SIX1Q15475 AC009452.1-201ENST00000640823 606 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX1Q15475 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.62□□□□□ -1.83
SIX1Q15475 AL451142.2-201ENST00000429076 2090 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 AL513302.2-201ENST00000562313 1842 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX1Q15475 AL122126.1-201ENST00000546905 1318 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 AL355596.1-201ENST00000565399 3996 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 AL355578.1-201ENST00000607405 1328 ntBASIC3.62□□□□□ -1.83
SIX1Q15475 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SIX1Q15475 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX1Q15475 AL049737.1-201ENST00000413920 1403 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 AC099786.3-201ENST00000565735 1410 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 SGO1P1-201ENST00000603525 1447 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SIX1Q15475 AL133412.1-201ENST00000380194 2992 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 AL118496.1-201ENST00000440201 1812 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 OTUD4P1-201ENST00000237841 3067 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SIX1Q15475 AL512646.1-201ENST00000269395 1077 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SIX1Q15475 AL079342.2-201ENST00000403367 482 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 RNU6ATAC-201ENST00000408749 126 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX1Q15475 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX1Q15475 GTF2IP23-201ENST00000423746 351 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 RAC1P8-201ENST00000427086 527 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 AC007389.2-201ENST00000434630 306 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX1Q15475 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX1Q15475 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX1Q15475 AC112492.1-201ENST00000449607 712 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 NDUFS5P3-201ENST00000450668 321 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 EIF4A1P11-201ENST00000451239 222 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX1Q15475 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX1Q15475 PTGES3P5-201ENST00000455109 434 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 AC087312.1-201ENST00000471411 480 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 MTCO3P35-201ENST00000485582 781 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 AP002812.1-201ENST00000495378 474 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 RNU6-311P-201ENST00000516224 102 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 SNORA70.19-201ENST00000516717 90 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX1Q15475 AC023632.1-201ENST00000518463 375 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.61□□□□□ -1.83
SIX1Q15475 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX1Q15475 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX1Q15475 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX1Q15475 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.61□□□□□ -1.83
SIX1Q15475 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX1Q15475 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.61□□□□□ -1.83
SIX1Q15475 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.61□□□□□ -1.83
SIX1Q15475 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX1Q15475 MTATP6P24-201ENST00000576835 677 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 MIR5685-201ENST00000579080 79 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX1Q15475 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX1Q15475 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.61□□□□□ -1.83
SIX1Q15475 PCNAP1-202ENST00000595299 752 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.61□□□□□ -1.83
SIX1Q15475 MIR92B-201ENST00000607575 96 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 AC123768.4-201ENST00000616244 701 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 AC069209.1-201ENST00000619282 651 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.61□□□□□ -1.83
SIX1Q15475 U4.6-201ENST00000621618 127 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 AP003355.3-201ENST00000623465 114 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.61□□□□□ -1.83
SIX1Q15475 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SIX1Q15475 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.61□□□□□ -1.83
SIX1Q15475 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 OR11H5P-202ENST00000641612 1325 ntBASIC3.61□□□□□ -1.83
SIX1Q15475 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SIX1Q15475 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SIX1Q15475 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX1Q15475 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.6□□□□□ -1.83
SIX1Q15475 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX1Q15475 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.6□□□□□ -1.83
SIX1Q15475 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX1Q15475 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SIX1Q15475 RNU4-68P-201ENST00000364314 141 ntBASIC3.6□□□□□ -1.83
SIX1Q15475 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SIX1Q15475 AL136310.1-201ENST00000404926 654 ntBASIC3.6□□□□□ -1.83
SIX1Q15475 ATP5A1P2-201ENST00000412323 255 ntBASIC3.6□□□□□ -1.83
SIX1Q15475 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms