Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC006483.1-201ENST00000487308 313 ntBASIC2.68□□□□□ -1.98
UBA52P62987 AC112198.1-201ENST00000505369 1220 ntBASIC2.68□□□□□ -1.98
UBA52P62987 AC069306.1-201ENST00000507006 843 ntBASIC2.68□□□□□ -1.98
UBA52P62987 MTND4LP22-201ENST00000508209 276 ntBASIC2.68□□□□□ -1.98
UBA52P62987 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.68□□□□□ -1.98
UBA52P62987 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.68□□□□□ -1.98
UBA52P62987 AC015917.1-201ENST00000579654 510 ntBASIC2.68□□□□□ -1.98
UBA52P62987 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.68□□□□□ -1.98
UBA52P62987 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.68□□□□□ -1.98
UBA52P62987 AC006504.3-201ENST00000586818 523 ntBASIC2.68□□□□□ -1.98
UBA52P62987 AC067852.3-201ENST00000589177 561 ntBASIC2.68□□□□□ -1.98
UBA52P62987 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.68□□□□□ -1.98
UBA52P62987 AC078899.3-201ENST00000599065 212 ntBASIC2.68□□□□□ -1.98
UBA52P62987 AC124312.4-201ENST00000605533 310 ntBASIC2.68□□□□□ -1.98
UBA52P62987 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.68□□□□□ -1.98
UBA52P62987 AC084036.1-201ENST00000609190 508 ntBASIC2.68□□□□□ -1.98
UBA52P62987 AC026422.1-201ENST00000623961 452 ntBASIC2.68□□□□□ -1.98
UBA52P62987 AC092184.1-201ENST00000625042 715 ntBASIC2.68□□□□□ -1.98
UBA52P62987 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.68□□□□□ -1.98
UBA52P62987 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.68□□□□□ -1.98
UBA52P62987 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
UBA52P62987 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.68□□□□□ -1.98
UBA52P62987 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
UBA52P62987 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.68□□□□□ -1.98
UBA52P62987 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.68□□□□□ -1.98
UBA52P62987 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.68□□□□□ -1.98
UBA52P62987 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
UBA52P62987 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
UBA52P62987 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBA52P62987 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
UBA52P62987 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
UBA52P62987 RNA5SP197-201ENST00000363357 119 ntBASIC2.67□□□□□ -1.98
UBA52P62987 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
UBA52P62987 RPL31P1-201ENST00000398116 372 ntBASIC2.67□□□□□ -1.98
UBA52P62987 RNU2-6P-201ENST00000411404 190 ntBASIC2.67□□□□□ -1.98
UBA52P62987 AC063979.1-201ENST00000415539 377 ntBASIC2.67□□□□□ -1.98
UBA52P62987 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.67□□□□□ -1.98
UBA52P62987 HSPE1P28-201ENST00000443139 211 ntBASIC2.67□□□□□ -1.98
UBA52P62987 HMGN2P21-201ENST00000447764 270 ntBASIC2.67□□□□□ -1.98
UBA52P62987 RPL23AP11-201ENST00000475260 469 ntBASIC2.67□□□□□ -1.98
UBA52P62987 AC006445.1-201ENST00000491925 405 ntBASIC2.67□□□□□ -1.98
UBA52P62987 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.67□□□□□ -1.98
UBA52P62987 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.67□□□□□ -1.98
UBA52P62987 HAUS1P1-201ENST00000505275 832 ntBASIC2.67□□□□□ -1.98
UBA52P62987 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.67□□□□□ -1.98
UBA52P62987 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.67□□□□□ -1.98
UBA52P62987 AL359198.2-201ENST00000611836 194 ntBASIC2.67□□□□□ -1.98
UBA52P62987 uc_338.1-201ENST00000612113 180 ntBASIC2.67□□□□□ -1.98
UBA52P62987 AC024023.1-201ENST00000624530 922 ntBASIC2.67□□□□□ -1.98
UBA52P62987 AC019080.5-201ENST00000624891 757 ntBASIC2.67□□□□□ -1.98
UBA52P62987 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBA52P62987 AC110774.1-201ENST00000623567 2018 ntBASIC2.67□□□□□ -1.98
UBA52P62987 AC007256.1-201ENST00000392253 2765 ntBASIC2.67□□□□□ -1.98
UBA52P62987 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBA52P62987 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
UBA52P62987 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.66□□□□□ -1.98
UBA52P62987 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.66□□□□□ -1.98
UBA52P62987 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.66□□□□□ -1.98
UBA52P62987 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
UBA52P62987 SNORA31-201ENST00000362607 130 ntBASIC2.66□□□□□ -1.98
UBA52P62987 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.66□□□□□ -1.98
UBA52P62987 AL138885.1-201ENST00000405921 675 ntBASIC2.66□□□□□ -1.98
UBA52P62987 MIR1289-1-201ENST00000408836 144 ntBASIC2.66□□□□□ -1.98
UBA52P62987 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.66□□□□□ -1.98
UBA52P62987 PRELID3BP11-201ENST00000414230 479 ntBASIC2.66□□□□□ -1.98
UBA52P62987 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
UBA52P62987 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.66□□□□□ -1.98
UBA52P62987 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.66□□□□□ -1.98
UBA52P62987 SAR1AP4-201ENST00000429225 591 ntBASIC2.66□□□□□ -1.98
UBA52P62987 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.66□□□□□ -1.98
UBA52P62987 RPS26P21-201ENST00000475397 348 ntBASIC2.66□□□□□ -1.98
UBA52P62987 AC096576.1-201ENST00000489014 359 ntBASIC2.66□□□□□ -1.98
UBA52P62987 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.66□□□□□ -1.98
UBA52P62987 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.66□□□□□ -1.98
UBA52P62987 TMEM248P1-201ENST00000510579 951 ntBASIC2.66□□□□□ -1.98
UBA52P62987 AC005921.1-201ENST00000510589 286 ntBASIC2.66□□□□□ -1.98
UBA52P62987 RN7SKP282-201ENST00000516824 299 ntBASIC2.66□□□□□ -1.98
UBA52P62987 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.66□□□□□ -1.98
UBA52P62987 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.66□□□□□ -1.98
UBA52P62987 AL163153.1-201ENST00000554223 283 ntBASIC2.66□□□□□ -1.98
UBA52P62987 AC092868.3-201ENST00000560515 784 ntBASIC2.66□□□□□ -1.98
UBA52P62987 AC023043.3-201ENST00000593113 385 ntBASIC2.66□□□□□ -1.98
UBA52P62987 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.66□□□□□ -1.98
UBA52P62987 PSMA6P4-201ENST00000603247 718 ntBASIC2.66□□□□□ -1.98
UBA52P62987 AC090425.2-201ENST00000608818 501 ntBASIC2.66□□□□□ -1.98
UBA52P62987 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.66□□□□□ -1.98
UBA52P62987 AC009464.1-201ENST00000615731 469 ntBASIC2.66□□□□□ -1.98
UBA52P62987 AL356274.1-201ENST00000617064 410 ntBASIC2.66□□□□□ -1.98
UBA52P62987 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
UBA52P62987 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UBA52P62987 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
UBA52P62987 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.98
UBA52P62987 AC009487.2-201ENST00000420969 6821 ntBASIC2.65□□□□□ -1.98
UBA52P62987 CR383658.2-201ENST00000547576 1525 ntBASIC2.65□□□□□ -1.99
UBA52P62987 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
UBA52P62987 RNU6-7-201ENST00000364784 107 ntBASIC2.65□□□□□ -1.99
UBA52P62987 RNU1-140P-201ENST00000365040 165 ntBASIC2.65□□□□□ -1.99
UBA52P62987 RNU6-8-201ENST00000365467 107 ntBASIC2.65□□□□□ -1.99
UBA52P62987 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
UBA52P62987 RPL31P52-201ENST00000407532 367 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms