Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC080125.1-201ENST00000414888 684 ntBASIC1.78□□□□□ -2.12
RPL39P62891 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC1.78□□□□□ -2.12
RPL39P62891 RPLP0P7-201ENST00000416050 667 ntBASIC1.78□□□□□ -2.12
RPL39P62891 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC1.78□□□□□ -2.12
RPL39P62891 AL034379.1-201ENST00000423216 253 ntBASIC1.78□□□□□ -2.12
RPL39P62891 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
RPL39P62891 MTCO2P17-201ENST00000424336 677 ntBASIC1.78□□□□□ -2.12
RPL39P62891 AC104332.2-201ENST00000429959 156 ntBASIC1.78□□□□□ -2.12
RPL39P62891 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.78□□□□□ -2.12
RPL39P62891 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.78□□□□□ -2.12
RPL39P62891 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.78□□□□□ -2.12
RPL39P62891 TRIM60P18-201ENST00000441518 828 ntBASIC1.78□□□□□ -2.12
RPL39P62891 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.78□□□□□ -2.12
RPL39P62891 IFNWP4-201ENST00000453148 294 ntBASIC1.78□□□□□ -2.12
RPL39P62891 AC090071.1-201ENST00000507713 644 ntBASIC1.78□□□□□ -2.12
RPL39P62891 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.78□□□□□ -2.12
RPL39P62891 RPL12P22-201ENST00000519073 490 ntBASIC1.78□□□□□ -2.12
RPL39P62891 AP003102.1-201ENST00000525638 661 ntBASIC1.78□□□□□ -2.12
RPL39P62891 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.78□□□□□ -2.12
RPL39P62891 CCNG2P1-201ENST00000549521 1000 ntBASIC1.78□□□□□ -2.12
RPL39P62891 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.78□□□□□ -2.12
RPL39P62891 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.78□□□□□ -2.12
RPL39P62891 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC1.78□□□□□ -2.12
RPL39P62891 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC1.78□□□□□ -2.12
RPL39P62891 AC083899.3-201ENST00000603413 594 ntBASIC1.78□□□□□ -2.12
RPL39P62891 AL645944.1-201ENST00000603857 493 ntBASIC1.78□□□□□ -2.12
RPL39P62891 AC012314.7-201ENST00000619693 93 ntBASIC1.78□□□□□ -2.12
RPL39P62891 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.78□□□□□ -2.12
RPL39P62891 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC1.78□□□□□ -2.12
RPL39P62891 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
RPL39P62891 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.78□□□□□ -2.12
RPL39P62891 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
RPL39P62891 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
RPL39P62891 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.77□□□□□ -2.13
RPL39P62891 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RPL39P62891 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RPL39P62891 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RPL39P62891 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RPL39P62891 VTRNA1-1-201ENST00000363120 99 ntBASIC1.77□□□□□ -2.13
RPL39P62891 RPL35AP12-201ENST00000425362 338 ntBASIC1.77□□□□□ -2.13
RPL39P62891 AL139132.1-201ENST00000431587 344 ntBASIC1.77□□□□□ -2.13
RPL39P62891 AC087499.2-201ENST00000432861 149 ntBASIC1.77□□□□□ -2.13
RPL39P62891 AC098826.1-201ENST00000433943 471 ntBASIC1.77□□□□□ -2.13
RPL39P62891 CR769767.1-201ENST00000436337 346 ntBASIC1.77□□□□□ -2.13
RPL39P62891 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.77□□□□□ -2.13
RPL39P62891 VN1R34P-201ENST00000447387 883 ntBASIC1.77□□□□□ -2.13
RPL39P62891 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.77□□□□□ -2.13
RPL39P62891 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC1.77□□□□□ -2.13
RPL39P62891 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC1.77□□□□□ -2.13
RPL39P62891 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.77□□□□□ -2.13
RPL39P62891 TMEM248P1-201ENST00000510579 951 ntBASIC1.77□□□□□ -2.13
RPL39P62891 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.77□□□□□ -2.13
RPL39P62891 AC010306.1-201ENST00000523223 1117 ntBASIC1.77□□□□□ -2.13
RPL39P62891 OR5BN1P-201ENST00000532955 829 ntBASIC1.77□□□□□ -2.13
RPL39P62891 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC1.77□□□□□ -2.13
RPL39P62891 AL121594.4-201ENST00000556211 1196 ntBASIC1.77□□□□□ -2.13
RPL39P62891 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.77□□□□□ -2.13
RPL39P62891 AC016877.3-201ENST00000606778 504 ntBASIC1.77□□□□□ -2.13
RPL39P62891 AC231759.1-201ENST00000616455 597 ntBASIC1.77□□□□□ -2.13
RPL39P62891 VN1R7P-201ENST00000619242 903 ntBASIC1.77□□□□□ -2.13
RPL39P62891 AL161637.1-201ENST00000622380 412 ntBASIC1.77□□□□□ -2.13
RPL39P62891 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
RPL39P62891 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
RPL39P62891 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
RPL39P62891 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.76□□□□□ -2.13
RPL39P62891 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
RPL39P62891 Y_RNA.126-201ENST00000363382 111 ntBASIC1.76□□□□□ -2.13
RPL39P62891 RNA5SP72-201ENST00000364442 117 ntBASIC1.76□□□□□ -2.13
RPL39P62891 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.76□□□□□ -2.13
RPL39P62891 ARL4AP4-201ENST00000434170 518 ntBASIC1.76□□□□□ -2.13
RPL39P62891 UBE2V2P1-201ENST00000434717 398 ntBASIC1.76□□□□□ -2.13
RPL39P62891 AC129850.1-201ENST00000436203 508 ntBASIC1.76□□□□□ -2.13
RPL39P62891 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.76□□□□□ -2.13
RPL39P62891 AL671855.1-201ENST00000446875 1203 ntBASIC1.76□□□□□ -2.13
RPL39P62891 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.76□□□□□ -2.13
RPL39P62891 AC026427.2-201ENST00000506228 536 ntBASIC1.76□□□□□ -2.13
RPL39P62891 HIGD1AP13-201ENST00000509878 289 ntBASIC1.76□□□□□ -2.13
RPL39P62891 AC074250.1-201ENST00000511117 192 ntBASIC1.76□□□□□ -2.13
RPL39P62891 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.76□□□□□ -2.13
RPL39P62891 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.76□□□□□ -2.13
RPL39P62891 OR5AK3P-201ENST00000527486 1297 ntBASIC1.76□□□□□ -2.13
RPL39P62891 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC1.76□□□□□ -2.13
RPL39P62891 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.76□□□□□ -2.13
RPL39P62891 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC1.76□□□□□ -2.13
RPL39P62891 MIR3158-1-201ENST00000583596 81 ntBASIC1.76□□□□□ -2.13
RPL39P62891 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC1.76□□□□□ -2.13
RPL39P62891 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.76□□□□□ -2.13
RPL39P62891 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RPL39P62891 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
RPL39P62891 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC1.76□□□□□ -2.13
RPL39P62891 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RPL39P62891 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
RPL39P62891 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.75□□□□□ -2.13
RPL39P62891 AC110774.1-201ENST00000623567 2018 ntBASIC1.75□□□□□ -2.13
RPL39P62891 METTL21EP-201ENST00000298105 713 ntBASIC1.75□□□□□ -2.13
RPL39P62891 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
RPL39P62891 SNORD62.1-201ENST00000362541 86 ntBASIC1.75□□□□□ -2.13
RPL39P62891 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
RPL39P62891 UBA52P6-201ENST00000399822 382 ntBASIC1.75□□□□□ -2.13
RPL39P62891 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms