Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.47□□□□□ -2.01
LSM3P62310 RPF2P1-201ENST00000424137 906 ntBASIC2.47□□□□□ -2.01
LSM3P62310 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.47□□□□□ -2.01
LSM3P62310 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.47□□□□□ -2.01
LSM3P62310 VN1R48P-201ENST00000448149 1036 ntBASIC2.47□□□□□ -2.01
LSM3P62310 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LSM3P62310 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.47□□□□□ -2.01
LSM3P62310 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LSM3P62310 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.47□□□□□ -2.01
LSM3P62310 RN7SKP82-201ENST00000516786 223 ntBASIC2.47□□□□□ -2.01
LSM3P62310 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.47□□□□□ -2.01
LSM3P62310 AC011611.1-201ENST00000552179 197 ntBASIC2.47□□□□□ -2.01
LSM3P62310 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.47□□□□□ -2.01
LSM3P62310 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.47□□□□□ -2.01
LSM3P62310 AL133393.1-201ENST00000603277 287 ntBASIC2.47□□□□□ -2.01
LSM3P62310 AC067959.1-201ENST00000604334 379 ntBASIC2.47□□□□□ -2.01
LSM3P62310 IGHV3-29-201ENST00000604817 344 ntBASIC2.47□□□□□ -2.01
LSM3P62310 AL161912.3-201ENST00000605404 628 ntBASIC2.47□□□□□ -2.01
LSM3P62310 AL023583.1-201ENST00000607518 1143 ntBASIC2.47□□□□□ -2.01
LSM3P62310 AC112503.1-201ENST00000608436 391 ntBASIC2.47□□□□□ -2.01
LSM3P62310 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.47□□□□□ -2.01
LSM3P62310 AL162574.2-201ENST00000614618 657 ntBASIC2.47□□□□□ -2.01
LSM3P62310 AC079228.1-201ENST00000624774 1049 ntBASIC2.47□□□□□ -2.01
LSM3P62310 AL034408.1-202ENST00000636088 415 ntBASIC2.47□□□□□ -2.01
LSM3P62310 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.47□□□□□ -2.01
LSM3P62310 AC119674.1-212ENST00000641155 993 ntBASIC2.47□□□□□ -2.01
LSM3P62310 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.46□□□□□ -2.01
LSM3P62310 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
LSM3P62310 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LSM3P62310 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.46□□□□□ -2.02
LSM3P62310 MIR585-201ENST00000384887 94 ntBASIC2.46□□□□□ -2.02
LSM3P62310 AL139095.1-201ENST00000404326 391 ntBASIC2.46□□□□□ -2.02
LSM3P62310 BTBD10P2-201ENST00000404779 676 ntBASIC2.46□□□□□ -2.02
LSM3P62310 MRPL50P2-201ENST00000416821 482 ntBASIC2.46□□□□□ -2.02
LSM3P62310 TOMM22P1-201ENST00000418578 312 ntBASIC2.46□□□□□ -2.02
LSM3P62310 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.46□□□□□ -2.02
LSM3P62310 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.46□□□□□ -2.02
LSM3P62310 AL031736.2-201ENST00000426573 787 ntBASIC2.46□□□□□ -2.02
LSM3P62310 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.46□□□□□ -2.02
LSM3P62310 AC104332.2-201ENST00000429959 156 ntBASIC2.46□□□□□ -2.02
LSM3P62310 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.46□□□□□ -2.02
LSM3P62310 AL513043.1-201ENST00000439124 535 ntBASIC2.46□□□□□ -2.02
LSM3P62310 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.46□□□□□ -2.02
LSM3P62310 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.46□□□□□ -2.02
LSM3P62310 Z75741.1-201ENST00000446793 314 ntBASIC2.46□□□□□ -2.02
LSM3P62310 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.46□□□□□ -2.02
LSM3P62310 AC117394.1-201ENST00000477323 567 ntBASIC2.46□□□□□ -2.02
LSM3P62310 RPS4XP13-201ENST00000483219 789 ntBASIC2.46□□□□□ -2.02
LSM3P62310 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.46□□□□□ -2.02
LSM3P62310 AC091826.1-201ENST00000514065 313 ntBASIC2.46□□□□□ -2.02
LSM3P62310 SNORA31.15-201ENST00000516771 132 ntBASIC2.46□□□□□ -2.02
LSM3P62310 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LSM3P62310 HIGD1AP18-201ENST00000520730 278 ntBASIC2.46□□□□□ -2.02
LSM3P62310 OR8I1P-201ENST00000529291 931 ntBASIC2.46□□□□□ -2.02
LSM3P62310 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.46□□□□□ -2.02
LSM3P62310 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.46□□□□□ -2.02
LSM3P62310 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.46□□□□□ -2.02
LSM3P62310 AC007224.1-201ENST00000564410 144 ntBASIC2.46□□□□□ -2.02
LSM3P62310 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.46□□□□□ -2.02
LSM3P62310 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LSM3P62310 AC115085.1-201ENST00000588924 229 ntBASIC2.46□□□□□ -2.02
LSM3P62310 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.46□□□□□ -2.02
LSM3P62310 AL162274.2-201ENST00000614406 332 ntBASIC2.46□□□□□ -2.02
LSM3P62310 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.46□□□□□ -2.02
LSM3P62310 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.46□□□□□ -2.02
LSM3P62310 CR392039.4-201ENST00000624968 501 ntBASIC2.46□□□□□ -2.02
LSM3P62310 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.45□□□□□ -2.02
LSM3P62310 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LSM3P62310 MIR26A1-201ENST00000362205 77 ntBASIC2.45□□□□□ -2.02
LSM3P62310 RNA5SP391-201ENST00000363456 119 ntBASIC2.45□□□□□ -2.02
LSM3P62310 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LSM3P62310 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LSM3P62310 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LSM3P62310 RAB9AP3-201ENST00000412737 573 ntBASIC2.45□□□□□ -2.02
LSM3P62310 RPS29P4-201ENST00000414733 161 ntBASIC2.45□□□□□ -2.02
LSM3P62310 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LSM3P62310 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.45□□□□□ -2.02
LSM3P62310 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.45□□□□□ -2.02
LSM3P62310 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.45□□□□□ -2.02
LSM3P62310 AC008065.1-201ENST00000428525 348 ntBASIC2.45□□□□□ -2.02
LSM3P62310 AL035246.1-201ENST00000433554 1255 ntBASIC2.45□□□□□ -2.02
LSM3P62310 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.45□□□□□ -2.02
LSM3P62310 RAB9AP1-201ENST00000449393 573 ntBASIC2.45□□□□□ -2.02
LSM3P62310 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.45□□□□□ -2.02
LSM3P62310 AC109925.1-201ENST00000478069 331 ntBASIC2.45□□□□□ -2.02
LSM3P62310 AC087190.1-201ENST00000484462 480 ntBASIC2.45□□□□□ -2.02
LSM3P62310 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LSM3P62310 SRIP1-201ENST00000489235 288 ntBASIC2.45□□□□□ -2.02
LSM3P62310 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.45□□□□□ -2.02
LSM3P62310 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.45□□□□□ -2.02
LSM3P62310 PAICSP4-201ENST00000517543 1253 ntBASIC2.45□□□□□ -2.02
LSM3P62310 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.45□□□□□ -2.02
LSM3P62310 AL163153.1-201ENST00000554223 283 ntBASIC2.45□□□□□ -2.02
LSM3P62310 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.45□□□□□ -2.02
LSM3P62310 CYCSP41-201ENST00000616920 296 ntBASIC2.45□□□□□ -2.02
LSM3P62310 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LSM3P62310 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
LSM3P62310 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LSM3P62310 AC109315.1-201ENST00000584143 1347 ntBASIC2.44□□□□□ -2.02
LSM3P62310 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms