Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL139421.1-201ENST00000423010 169 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC4P56524 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC4P56524 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
HDAC4P56524 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.36□□□□□ -1.71
HDAC4P56524 AC104978.1-201ENST00000449387 391 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 AL122001.1-201ENST00000457027 370 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
HDAC4P56524 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
HDAC4P56524 AC109327.1-201ENST00000471666 403 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 AF213884.1-201ENST00000488102 463 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.36□□□□□ -1.71
HDAC4P56524 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC4P56524 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC4P56524 AC099522.1-202ENST00000514718 367 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 MTCO1P30-201ENST00000515244 580 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 ARL2BPP5-201ENST00000523141 481 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.36□□□□□ -1.71
HDAC4P56524 AC087373.1-201ENST00000524920 491 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC4P56524 AC105233.3-201ENST00000531125 744 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC4P56524 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC4P56524 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.36□□□□□ -1.71
HDAC4P56524 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC4P56524 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC4P56524 AC063950.1-201ENST00000552036 308 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC4P56524 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.36□□□□□ -1.71
HDAC4P56524 CENPUP2-201ENST00000555897 1186 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC4P56524 AC074051.3-201ENST00000570238 358 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.36□□□□□ -1.71
HDAC4P56524 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC4P56524 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC4P56524 AL133507.1-201ENST00000605269 557 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 MIR92B-201ENST00000607575 96 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 MIR6716-201ENST00000613413 80 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 AC069209.1-201ENST00000619282 651 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 AC034229.5-201ENST00000624258 185 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 AC103706.2-201ENST00000638080 240 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC4P56524 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC4P56524 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC4P56524 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC4P56524 AP000526.1-201ENST00000603308 1388 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.36□□□□□ -1.71
HDAC4P56524 MAPK10-253ENST00000641010 4072 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 MTND5P28-201ENST00000438005 1594 ntBASIC4.36□□□□□ -1.71
HDAC4P56524 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
HDAC4P56524 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC4P56524 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC4P56524 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC4P56524 BTBD10P2-201ENST00000404779 676 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AL138878.1-201ENST00000405131 347 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 ZNF603P-201ENST00000405613 487 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 RN7SKP182-201ENST00000410772 298 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AC009518.2-201ENST00000418056 731 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC4P56524 MTCO3P1-205ENST00000422088 832 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC4P56524 OR51AB1P-201ENST00000429046 620 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 RPL36P19-201ENST00000430744 301 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 FTH1P6-201ENST00000430768 320 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 COX6B1P7-201ENST00000430845 235 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC4P56524 BMS1P19-201ENST00000433925 393 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 ELOCP18-201ENST00000434209 337 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AC241584.1-201ENST00000438469 1241 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 MTND3P1-201ENST00000441336 220 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 RPS26P56-201ENST00000444468 240 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.35□□□□□ -1.71
HDAC4P56524 RNA5SP246-201ENST00000458909 119 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 UQCRHP4-201ENST00000471686 272 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 ACTG1P13-201ENST00000486987 1043 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC4P56524 AC139783.2-201ENST00000504847 1145 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 HSPE1P23-201ENST00000509838 286 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 USP9YP5-201ENST00000511770 630 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AC026402.1-201ENST00000513642 170 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 MIR2114-201ENST00000516645 80 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 SNORA48.10-201ENST00000516965 160 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AC027309.2-201ENST00000520566 192 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC4P56524 AP003461.1-201ENST00000528866 78 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.35□□□□□ -1.71
HDAC4P56524 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC4P56524 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC4P56524 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
HDAC4P56524 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.35□□□□□ -1.71
HDAC4P56524 HIGD1AP17-201ENST00000554576 276 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AGGF1P8-201ENST00000562979 1000 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.35□□□□□ -1.71
HDAC4P56524 MTCYBP28-201ENST00000566728 1132 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC4P56524 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.35□□□□□ -1.71
HDAC4P56524 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC4P56524 AC004223.2-201ENST00000590309 544 ntBASIC4.35□□□□□ -1.71
HDAC4P56524 AL158042.1-201ENST00000605338 460 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms