Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC005539.1-201ENST00000443768 1479 ntBASIC3.78□□□□□ -1.8
CDH11P55287 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH11P55287 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CDH11P55287 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDH11P55287 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.78□□□□□ -1.81
CDH11P55287 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.78□□□□□ -1.81
CDH11P55287 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.77□□□□□ -1.81
CDH11P55287 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH11P55287 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH11P55287 MAPK10-373ENST00000641983 6772 ntBASIC3.77□□□□□ -1.81
CDH11P55287 MTND5P28-201ENST00000438005 1594 ntBASIC3.77□□□□□ -1.81
CDH11P55287 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH11P55287 SNORA37-201ENST00000384504 129 ntBASIC3.77□□□□□ -1.81
CDH11P55287 SNORA11F-201ENST00000408237 128 ntBASIC3.77□□□□□ -1.81
CDH11P55287 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH11P55287 RNU4-72P-201ENST00000410754 173 ntBASIC3.77□□□□□ -1.81
CDH11P55287 RN7SKP263-201ENST00000411194 309 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AMD1P2-201ENST00000412936 992 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH11P55287 MTND2P18-201ENST00000419962 1030 ntBASIC3.77□□□□□ -1.81
CDH11P55287 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH11P55287 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 SETP8-201ENST00000435341 628 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH11P55287 AC114755.5-201ENST00000447760 831 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 RSL24D1P3-201ENST00000449255 495 ntBASIC3.77□□□□□ -1.81
CDH11P55287 RPL23AP81-201ENST00000455252 467 ntBASIC3.77□□□□□ -1.81
CDH11P55287 RPL18AP17-201ENST00000455326 198 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH11P55287 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH11P55287 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH11P55287 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 SLC2A13P1-201ENST00000531560 322 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 AC090502.2-201ENST00000549267 280 ntBASIC3.77□□□□□ -1.81
CDH11P55287 CBX3P5-201ENST00000552017 521 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AC007424.1-203ENST00000554613 687 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 MTCYBP28-201ENST00000566728 1132 ntBASIC3.77□□□□□ -1.81
CDH11P55287 HNRNPCP4-201ENST00000571636 900 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 AC106791.2-201ENST00000604680 391 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AL133507.1-201ENST00000605269 557 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AC112220.3-201ENST00000605502 502 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AC010857.1-201ENST00000606398 594 ntBASIC3.77□□□□□ -1.81
CDH11P55287 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH11P55287 uc_338.32-201ENST00000615087 172 ntBASIC3.77□□□□□ -1.81
CDH11P55287 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AC090246.1-201ENST00000616499 426 ntBASIC3.77□□□□□ -1.81
CDH11P55287 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH11P55287 ZYXP1-201ENST00000617638 118 ntBASIC3.77□□□□□ -1.81
CDH11P55287 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH11P55287 AC004943.3-201ENST00000624116 600 ntBASIC3.77□□□□□ -1.81
CDH11P55287 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH11P55287 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH11P55287 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CDH11P55287 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH11P55287 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CDH11P55287 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH11P55287 AL049555.1-201ENST00000562834 1933 ntBASIC3.76□□□□□ -1.81
CDH11P55287 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH11P55287 AC008725.1-201ENST00000605123 2263 ntBASIC3.76□□□□□ -1.81
CDH11P55287 AC011978.2-201ENST00000569835 2054 ntBASIC3.76□□□□□ -1.81
CDH11P55287 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH11P55287 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CDH11P55287 AL121657.1-201ENST00000327215 531 ntBASIC3.76□□□□□ -1.81
CDH11P55287 Y_RNA.25-201ENST00000362528 102 ntBASIC3.76□□□□□ -1.81
CDH11P55287 RNU6-1200P-201ENST00000384162 107 ntBASIC3.76□□□□□ -1.81
CDH11P55287 MIR649-201ENST00000384843 97 ntBASIC3.76□□□□□ -1.81
CDH11P55287 ZNF603P-201ENST00000405613 487 ntBASIC3.76□□□□□ -1.81
CDH11P55287 PIGPP2-201ENST00000411569 458 ntBASIC3.76□□□□□ -1.81
CDH11P55287 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH11P55287 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.76□□□□□ -1.81
CDH11P55287 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH11P55287 AC098592.1-201ENST00000419352 333 ntBASIC3.76□□□□□ -1.81
CDH11P55287 USP9YP26-201ENST00000421008 661 ntBASIC3.76□□□□□ -1.81
CDH11P55287 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH11P55287 OR4F13P-201ENST00000428478 931 ntBASIC3.76□□□□□ -1.81
CDH11P55287 VDAC1P6-201ENST00000430062 855 ntBASIC3.76□□□□□ -1.81
CDH11P55287 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH11P55287 AL512326.1-201ENST00000443050 721 ntBASIC3.76□□□□□ -1.81
CDH11P55287 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH11P55287 IFNWP4-201ENST00000453148 294 ntBASIC3.76□□□□□ -1.81
CDH11P55287 TRGVB-201ENST00000453257 471 ntBASIC3.76□□□□□ -1.81
CDH11P55287 MTND1P16-201ENST00000465177 898 ntBASIC3.76□□□□□ -1.81
CDH11P55287 RPS20P21-201ENST00000466859 343 ntBASIC3.76□□□□□ -1.81
CDH11P55287 S100A11P1-201ENST00000477525 312 ntBASIC3.76□□□□□ -1.81
CDH11P55287 AC041039.1-201ENST00000485656 536 ntBASIC3.76□□□□□ -1.81
CDH11P55287 RPL35P6-201ENST00000490024 372 ntBASIC3.76□□□□□ -1.81
CDH11P55287 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH11P55287 AC091167.1-201ENST00000492017 396 ntBASIC3.76□□□□□ -1.81
CDH11P55287 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms