Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
RFX1P22670 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
RFX1P22670 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
RFX1P22670 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RFX1P22670 AP001284.1-201ENST00000528393 2118 ntBASIC6.34□□□□□ -1.39
RFX1P22670 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RFX1P22670 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.34□□□□□ -1.39
RFX1P22670 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RFX1P22670 Y_RNA.184-201ENST00000363884 108 ntBASIC6.34□□□□□ -1.39
RFX1P22670 RNU6-38P-201ENST00000384085 107 ntBASIC6.34□□□□□ -1.39
RFX1P22670 RNU6-903P-201ENST00000391270 109 ntBASIC6.34□□□□□ -1.39
RFX1P22670 AL359643.1-201ENST00000404109 423 ntBASIC6.34□□□□□ -1.39
RFX1P22670 METTL15P3-201ENST00000415522 1221 ntBASIC6.34□□□□□ -1.39
RFX1P22670 OR1AA1P-201ENST00000419597 916 ntBASIC6.34□□□□□ -1.39
RFX1P22670 RPL34P3-201ENST00000421454 338 ntBASIC6.34□□□□□ -1.39
RFX1P22670 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RFX1P22670 AC024082.2-201ENST00000434771 238 ntBASIC6.34□□□□□ -1.39
RFX1P22670 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.34□□□□□ -1.39
RFX1P22670 RNU6-333P-201ENST00000459117 107 ntBASIC6.34□□□□□ -1.39
RFX1P22670 AC006967.1-201ENST00000467608 589 ntBASIC6.34□□□□□ -1.39
RFX1P22670 RN7SL269P-201ENST00000467795 305 ntBASIC6.34□□□□□ -1.39
RFX1P22670 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.34□□□□□ -1.39
RFX1P22670 SNORA70.20-201ENST00000516848 126 ntBASIC6.34□□□□□ -1.39
RFX1P22670 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.34□□□□□ -1.39
RFX1P22670 IGKV2D-36-201ENST00000518643 226 ntBASIC6.34□□□□□ -1.39
RFX1P22670 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.34□□□□□ -1.39
RFX1P22670 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.34□□□□□ -1.39
RFX1P22670 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.34□□□□□ -1.39
RFX1P22670 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.34□□□□□ -1.39
RFX1P22670 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.34□□□□□ -1.39
RFX1P22670 AC044860.2-201ENST00000561005 179 ntBASIC6.34□□□□□ -1.39
RFX1P22670 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.34□□□□□ -1.39
RFX1P22670 TXNP4-201ENST00000575018 310 ntBASIC6.34□□□□□ -1.39
RFX1P22670 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.34□□□□□ -1.39
RFX1P22670 AL133255.1-201ENST00000606374 441 ntBASIC6.34□□□□□ -1.39
RFX1P22670 AL133481.2-203ENST00000607558 139 ntBASIC6.34□□□□□ -1.39
RFX1P22670 AL031666.3-201ENST00000609320 1006 ntBASIC6.34□□□□□ -1.39
RFX1P22670 AC006329.2-201ENST00000611491 394 ntBASIC6.34□□□□□ -1.39
RFX1P22670 AC104237.2-201ENST00000612456 443 ntBASIC6.34□□□□□ -1.39
RFX1P22670 AP005431.1-201ENST00000618479 319 ntBASIC6.34□□□□□ -1.39
RFX1P22670 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.34□□□□□ -1.39
RFX1P22670 AC068831.8-201ENST00000620171 435 ntBASIC6.34□□□□□ -1.39
RFX1P22670 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RFX1P22670 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RFX1P22670 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.34□□□□□ -1.39
RFX1P22670 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.34□□□□□ -1.39
RFX1P22670 AP000547.3-204ENST00000588548 2523 ntBASIC6.34□□□□□ -1.39
RFX1P22670 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.34□□□□□ -1.4
RFX1P22670 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.34□□□□□ -1.4
RFX1P22670 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
RFX1P22670 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.4
RFX1P22670 AC116667.1-201ENST00000604855 2072 ntBASIC6.34□□□□□ -1.4
RFX1P22670 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.33□□□□□ -1.4
RFX1P22670 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
RFX1P22670 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RFX1P22670 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RFX1P22670 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
RFX1P22670 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RFX1P22670 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RFX1P22670 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.33□□□□□ -1.4
RFX1P22670 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.33□□□□□ -1.4
RFX1P22670 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RFX1P22670 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RFX1P22670 RNU6-552P-201ENST00000362869 119 ntBASIC6.33□□□□□ -1.4
RFX1P22670 RN7SKP160-201ENST00000363804 340 ntBASIC6.33□□□□□ -1.4
RFX1P22670 RNU4-20P-201ENST00000365601 151 ntBASIC6.33□□□□□ -1.4
RFX1P22670 AC019155.1-201ENST00000382242 574 ntBASIC6.33□□□□□ -1.4
RFX1P22670 RNU4-26P-201ENST00000410270 107 ntBASIC6.33□□□□□ -1.4
RFX1P22670 NDUFB4P5-201ENST00000415445 361 ntBASIC6.33□□□□□ -1.4
RFX1P22670 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.33□□□□□ -1.4
RFX1P22670 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.33□□□□□ -1.4
RFX1P22670 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.33□□□□□ -1.4
RFX1P22670 RPS12P17-201ENST00000438591 377 ntBASIC6.33□□□□□ -1.4
RFX1P22670 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.33□□□□□ -1.4
RFX1P22670 AC079804.1-201ENST00000461922 436 ntBASIC6.33□□□□□ -1.4
RFX1P22670 AL122020.1-201ENST00000472287 459 ntBASIC6.33□□□□□ -1.4
RFX1P22670 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.33□□□□□ -1.4
RFX1P22670 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC6.33□□□□□ -1.4
RFX1P22670 AP006245.2-201ENST00000522004 300 ntBASIC6.33□□□□□ -1.4
RFX1P22670 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.33□□□□□ -1.4
RFX1P22670 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC6.33□□□□□ -1.4
RFX1P22670 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.33□□□□□ -1.4
RFX1P22670 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
RFX1P22670 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.33□□□□□ -1.4
RFX1P22670 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
RFX1P22670 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
RFX1P22670 AL513327.3-201ENST00000602618 469 ntBASIC6.33□□□□□ -1.4
RFX1P22670 AC087763.1-201ENST00000603391 286 ntBASIC6.33□□□□□ -1.4
RFX1P22670 AL365204.3-201ENST00000612448 685 ntBASIC6.33□□□□□ -1.4
RFX1P22670 AL021918.2-201ENST00000613415 194 ntBASIC6.33□□□□□ -1.4
RFX1P22670 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.33□□□□□ -1.4
RFX1P22670 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.33□□□□□ -1.4
RFX1P22670 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.33□□□□□ -1.4
RFX1P22670 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RFX1P22670 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.33□□□□□ -1.4
RFX1P22670 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RFX1P22670 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RFX1P22670 AP002512.4-202ENST00000641599 4530 ntBASIC6.33□□□□□ -1.4
RFX1P22670 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFX1P22670 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms