Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.53□□□□□ -1.84
TPM1P09493 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.53□□□□□ -1.84
TPM1P09493 RPL7P59-201ENST00000447700 943 ntBASIC3.53□□□□□ -1.84
TPM1P09493 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.53□□□□□ -1.84
TPM1P09493 AC006483.1-201ENST00000487308 313 ntBASIC3.53□□□□□ -1.84
TPM1P09493 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TPM1P09493 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.53□□□□□ -1.84
TPM1P09493 AC104619.4-201ENST00000510773 249 ntBASIC3.53□□□□□ -1.84
TPM1P09493 RN7SKP13-201ENST00000515933 244 ntBASIC3.53□□□□□ -1.84
TPM1P09493 IGKV2-26-201ENST00000518305 343 ntBASIC3.53□□□□□ -1.84
TPM1P09493 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.53□□□□□ -1.84
TPM1P09493 AC007536.1-201ENST00000533382 349 ntBASIC3.53□□□□□ -1.84
TPM1P09493 EIF1AXP2-201ENST00000555940 413 ntBASIC3.53□□□□□ -1.84
TPM1P09493 AC034268.2-201ENST00000571784 482 ntBASIC3.53□□□□□ -1.84
TPM1P09493 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.53□□□□□ -1.84
TPM1P09493 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.53□□□□□ -1.84
TPM1P09493 AC073111.2-201ENST00000605657 1075 ntBASIC3.53□□□□□ -1.84
TPM1P09493 AC083809.1-201ENST00000615051 472 ntBASIC3.53□□□□□ -1.84
TPM1P09493 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.53□□□□□ -1.84
TPM1P09493 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.53□□□□□ -1.84
TPM1P09493 AC073348.1-201ENST00000623002 331 ntBASIC3.53□□□□□ -1.84
TPM1P09493 AC020923.1-201ENST00000624021 917 ntBASIC3.53□□□□□ -1.84
TPM1P09493 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.53□□□□□ -1.84
TPM1P09493 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TPM1P09493 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TPM1P09493 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.53□□□□□ -1.84
TPM1P09493 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TPM1P09493 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.53□□□□□ -1.84
TPM1P09493 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
TPM1P09493 RNU4-35P-201ENST00000362588 141 ntBASIC3.52□□□□□ -1.85
TPM1P09493 RNU6-1243P-201ENST00000364028 107 ntBASIC3.52□□□□□ -1.85
TPM1P09493 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
TPM1P09493 DEFB109C-201ENST00000382575 264 ntBASIC3.52□□□□□ -1.85
TPM1P09493 DEFB109B-201ENST00000382656 264 ntBASIC3.52□□□□□ -1.85
TPM1P09493 AL121972.1-201ENST00000402023 252 ntBASIC3.52□□□□□ -1.85
TPM1P09493 RPL5P18-201ENST00000406671 891 ntBASIC3.52□□□□□ -1.85
TPM1P09493 RNA5SP229-201ENST00000410809 99 ntBASIC3.52□□□□□ -1.85
TPM1P09493 LINC01347-201ENST00000417964 355 ntBASIC3.52□□□□□ -1.85
TPM1P09493 BX842559.1-201ENST00000419615 532 ntBASIC3.52□□□□□ -1.85
TPM1P09493 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.52□□□□□ -1.85
TPM1P09493 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.52□□□□□ -1.85
TPM1P09493 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.52□□□□□ -1.85
TPM1P09493 TRIM60P18-201ENST00000441518 828 ntBASIC3.52□□□□□ -1.85
TPM1P09493 ATP5C1P1-201ENST00000441945 895 ntBASIC3.52□□□□□ -1.85
TPM1P09493 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.52□□□□□ -1.85
TPM1P09493 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.52□□□□□ -1.85
TPM1P09493 NPM1P13-201ENST00000452663 865 ntBASIC3.52□□□□□ -1.85
TPM1P09493 RPS24P6-201ENST00000452670 400 ntBASIC3.52□□□□□ -1.85
TPM1P09493 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.52□□□□□ -1.85
TPM1P09493 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.52□□□□□ -1.85
TPM1P09493 MTND4LP22-201ENST00000508209 276 ntBASIC3.52□□□□□ -1.85
TPM1P09493 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.52□□□□□ -1.85
TPM1P09493 RN7SKP43-201ENST00000516173 320 ntBASIC3.52□□□□□ -1.85
TPM1P09493 AC008676.3-201ENST00000521237 435 ntBASIC3.52□□□□□ -1.85
TPM1P09493 AC139103.1-201ENST00000534696 1030 ntBASIC3.52□□□□□ -1.85
TPM1P09493 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.52□□□□□ -1.85
TPM1P09493 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
TPM1P09493 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.52□□□□□ -1.85
TPM1P09493 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.52□□□□□ -1.85
TPM1P09493 AC084035.1-201ENST00000634543 607 ntBASIC3.52□□□□□ -1.85
TPM1P09493 API5P2-201ENST00000397055 1498 ntBASIC3.52□□□□□ -1.85
TPM1P09493 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.51□□□□□ -1.85
TPM1P09493 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TPM1P09493 MTND5P28-201ENST00000438005 1594 ntBASIC3.51□□□□□ -1.85
TPM1P09493 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TPM1P09493 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TPM1P09493 AL122126.1-201ENST00000546905 1318 ntBASIC3.51□□□□□ -1.85
TPM1P09493 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TPM1P09493 RNA5SP119-201ENST00000362715 117 ntBASIC3.51□□□□□ -1.85
TPM1P09493 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TPM1P09493 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TPM1P09493 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.51□□□□□ -1.85
TPM1P09493 MIR887-201ENST00000401258 79 ntBASIC3.51□□□□□ -1.85
TPM1P09493 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.51□□□□□ -1.85
TPM1P09493 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.51□□□□□ -1.85
TPM1P09493 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.51□□□□□ -1.85
TPM1P09493 AC009220.1-201ENST00000451614 275 ntBASIC3.51□□□□□ -1.85
TPM1P09493 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.51□□□□□ -1.85
TPM1P09493 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.51□□□□□ -1.85
TPM1P09493 RPS15AP1-201ENST00000457423 391 ntBASIC3.51□□□□□ -1.85
TPM1P09493 snoU13.24-201ENST00000458998 104 ntBASIC3.51□□□□□ -1.85
TPM1P09493 AC091959.2-201ENST00000477363 321 ntBASIC3.51□□□□□ -1.85
TPM1P09493 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.51□□□□□ -1.85
TPM1P09493 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.51□□□□□ -1.85
TPM1P09493 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.51□□□□□ -1.85
TPM1P09493 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.51□□□□□ -1.85
TPM1P09493 RNU1-61P-201ENST00000516107 151 ntBASIC3.51□□□□□ -1.85
TPM1P09493 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.51□□□□□ -1.85
TPM1P09493 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.51□□□□□ -1.85
TPM1P09493 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.51□□□□□ -1.85
TPM1P09493 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.51□□□□□ -1.85
TPM1P09493 SERPINE4P-201ENST00000554978 281 ntBASIC3.51□□□□□ -1.85
TPM1P09493 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.51□□□□□ -1.85
TPM1P09493 AC012182.1-201ENST00000570133 895 ntBASIC3.51□□□□□ -1.85
TPM1P09493 AL162713.1-201ENST00000604480 262 ntBASIC3.51□□□□□ -1.85
TPM1P09493 AL009028.1-201ENST00000604895 802 ntBASIC3.51□□□□□ -1.85
TPM1P09493 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.51□□□□□ -1.85
TPM1P09493 AC108206.1-201ENST00000570186 4159 ntBASIC3.51□□□□□ -1.85
TPM1P09493 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
TPM1P09493 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms