Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 AL121603.1-201ENST00000553815 142 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 AL845331.3-202ENST00000562856 261 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 NF1P5-201ENST00000588287 448 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 MIMT1-201ENST00000597105 1050 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 AC015871.2-201ENST00000603605 948 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 MIR8057-201ENST00000620957 69 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CTDNEP1O95476 SEPT7P7-201ENST00000420492 1301 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CTDNEP1O95476 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CTDNEP1O95476 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CTDNEP1O95476 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CTDNEP1O95476 MTND5P27-201ENST00000428871 1720 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CTDNEP1O95476 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 AL589655.1-201ENST00000405398 482 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 RNF19BPX-201ENST00000426224 625 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CTDNEP1O95476 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 ZFAND6P1-201ENST00000434138 605 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 AP002345.1-201ENST00000456493 928 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 CFTRP1-201ENST00000456646 183 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 HMGB3P30-201ENST00000457863 606 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 AC078785.3-201ENST00000476607 425 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 ACTR6P1-201ENST00000514311 1104 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 AC025260.1-201ENST00000548858 430 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 AC034105.3-201ENST00000565294 442 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 AC006270.2-201ENST00000578523 652 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 AC083760.1-201ENST00000589621 670 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 AC006539.2-201ENST00000601729 572 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 AL355802.4-201ENST00000607635 548 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 AC005021.1-201ENST00000608730 355 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 AL159169.3-201ENST00000608871 561 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 AL162233.1-201ENST00000620014 944 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 HPVC1-201ENST00000629899 1198 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 AL163152.1-201ENST00000642001 374 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 RNF6P1-201ENST00000444889 1784 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CTDNEP1O95476 DCAF13P1-201ENST00000495256 1330 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 OR5BR1P-201ENST00000524992 1330 ntBASIC3.42□□□□□ -1.86
CTDNEP1O95476 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTDNEP1O95476 GABPAP-201ENST00000419271 1356 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC000367.1-201ENST00000452711 1766 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTDNEP1O95476 SNORA38.1-201ENST00000364172 131 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 CCNB2P1-201ENST00000399411 1150 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC019070.1-201ENST00000415008 1024 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC009969.1-201ENST00000438726 172 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.41□□□□□ -1.86
CTDNEP1O95476 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.41□□□□□ -1.86
CTDNEP1O95476 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC023141.12-201ENST00000512399 199 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC009812.2-201ENST00000517657 457 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 OR4V1P-201ENST00000525394 1140 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC107294.3-201ENST00000609211 526 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC096577.2-201ENST00000611455 153 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 ATP5A1P2-202ENST00000616464 443 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 AL355493.4-201ENST00000618530 292 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 AC008264.2-201ENST00000610193 3731 ntBASIC3.41□□□□□ -1.86
CTDNEP1O95476 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTDNEP1O95476 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CTDNEP1O95476 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTDNEP1O95476 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTDNEP1O95476 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CTDNEP1O95476 MTND4P21-201ENST00000453886 1357 ntBASIC3.4□□□□□ -1.86
CTDNEP1O95476 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CTDNEP1O95476 RNU1-35P-201ENST00000362782 153 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 SNORA71.1-201ENST00000364523 117 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms