Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ODF3-202ENST00000342593 386 ntTSL 5 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 SNORA70C-201ENST00000384538 135 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 MIR223-201ENST00000385204 110 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 MIR301B-201ENST00000390813 78 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 U3.37-201ENST00000408528 213 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 RNA5SP317-201ENST00000410176 116 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 RNA5SP311-201ENST00000411290 116 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 MTND1P23-201ENST00000416931 372 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 B3GALNT1P1-201ENST00000420569 975 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 Z82198.3-201ENST00000421145 199 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC096632.1-201ENST00000427395 310 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 RPS29P17-201ENST00000430795 166 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 Z77249.1-201ENST00000444622 1175 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 MRPL42P6-201ENST00000486397 371 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 RPL37P23-201ENST00000492641 294 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC025768.1-201ENST00000510057 267 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 RNA5SP315-201ENST00000516340 116 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 RNA5SP312-201ENST00000517068 116 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 SNORA31.20-201ENST00000517111 133 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 LECT2-205ENST00000522943 574 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC104115.2-201ENST00000523026 687 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 MTCO1P47-201ENST00000523889 1271 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC087241.2-201ENST00000535801 324 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC090616.3-201ENST00000582184 217 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 NPM1P45-201ENST00000583151 559 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC024153.1-201ENST00000603103 365 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AC108865.2-201ENST00000606881 432 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 AL512356.3-201ENST00000623005 461 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LINC01558Q9Y6Z2 ZNF658B-202ENST00000615961 3375 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 CCT8P1-201ENST00000413611 1657 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC007342.9-201ENST00000623877 1385 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC005336.3-201ENST00000623833 2679 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC011460.1-201ENST00000636268 1834 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AL596028.1-201ENST00000326971 197 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 SET-203ENST00000372688 801 ntTSL 2 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AL121972.1-201ENST00000402023 252 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 MIR1275-201ENST00000408770 80 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 CYCSP19-201ENST00000411715 316 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC104837.2-201ENST00000427236 424 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 CNOT7P1-201ENST00000429006 852 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 ELOCP23-201ENST00000452014 332 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 RNA5SP310-201ENST00000459084 116 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC015908.1-201ENST00000478739 476 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 RPL23AP70-201ENST00000483361 460 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC007686.1-201ENST00000488511 463 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 RNU6-319P-201ENST00000516025 108 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 RNA5SP75-201ENST00000516841 111 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 FAM60DP-201ENST00000524174 632 ntBASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LINC01558Q9Y6Z2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms