Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC241584.1-201ENST00000438469 1241 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC091167.1-201ENST00000492017 396 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 SETP14-201ENST00000497538 873 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC147055.4-201ENST00000504399 745 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC005178.1-201ENST00000508392 440 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 MTCYBP37-201ENST00000510642 1133 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 RNA5SP497-201ENST00000516081 97 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 SNORA31.9-201ENST00000516429 84 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 ARL2BPP5-201ENST00000523141 481 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC124068.1-201ENST00000563131 678 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC007599.1-201ENST00000568688 1174 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AP000811.1-201ENST00000603803 651 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC064872.1-201ENST00000604823 1072 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 ARF4P1-201ENST00000605447 541 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AL445567.2-201ENST00000618935 498 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AL023881.1-201ENST00000621088 301 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AC098679.5-201ENST00000624394 571 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 MIR3653-201ENST00000625572 110 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 MKKS-204ENST00000639674 192 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 AL390237.1-201ENST00000404226 1415 ntBASIC4.38□□□□□ -1.71
NCKIPSDQ9NZQ3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 RNU6-931P-201ENST00000363850 107 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 RNU6-441P-201ENST00000384545 106 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 RPS3AP26-201ENST00000398259 784 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC073136.2-201ENST00000417282 849 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 DLGAP5P1-201ENST00000430307 464 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AL360221.1-201ENST00000445989 335 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AL451050.1-201ENST00000450126 415 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 MTCO2P18-201ENST00000457151 658 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC087879.1-201ENST00000474343 374 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC093824.1-201ENST00000508796 343 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC109445.1-201ENST00000512356 383 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC018797.3-201ENST00000513388 1241 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 RN7SKP31-201ENST00000516354 278 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 RPL12P22-201ENST00000519073 490 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AP003730.1-201ENST00000524605 285 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC024909.2-201ENST00000553035 286 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 CYP4A43P-201ENST00000568156 121 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC079171.1-201ENST00000568788 914 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 VN1R82P-201ENST00000601481 356 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC103881.1-201ENST00000603476 538 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC018714.1-201ENST00000605028 208 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AL607023.1-201ENST00000620045 248 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AP000843.1-201ENST00000624880 701 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 FP325313.1-201ENST00000638228 703 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 AC107982.1-201ENST00000507171 1300 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 MTND4P4-201ENST00000439033 1366 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 ERCC6-202ENST00000374127 1782 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NCKIPSDQ9NZQ3 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 MTND5P28-201ENST00000438005 1594 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AC087190.4-201ENST00000574616 8334 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 CR381670.1-201ENST00000624291 1693 ntBASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.36□□□□□ -1.71
NCKIPSDQ9NZQ3 Y_RNA.126-201ENST00000363382 111 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms