Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 HMGN2P16-201ENST00000456802 261 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AC012181.1-201ENST00000479895 423 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 RN7SL293P-201ENST00000481765 281 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TREX1Q9NSU2 RN7SKP244-201ENST00000516513 307 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AP001207.2-201ENST00000519490 539 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AC090751.1-201ENST00000566966 267 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AL365400.2-201ENST00000605604 902 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AC073657.2-201ENST00000605661 303 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AL157817.1-201ENST00000614264 790 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AC009464.1-201ENST00000615731 469 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.25□□□□□ -1.89
TREX1Q9NSU2 MIR7153-201ENST00000637758 57 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.25□□□□□ -1.89
TREX1Q9NSU2 AC118273.1-201ENST00000525324 3006 ntBASIC3.25□□□□□ -1.89
TREX1Q9NSU2 ZNF542P-204ENST00000482727 1305 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 SRP72P2-201ENST00000344851 1979 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 U3.11-201ENST00000364476 212 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 SNORA11-201ENST00000408789 128 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AC006960.1-201ENST00000419980 153 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AL159987.2-201ENST00000432754 307 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 VDAC1P3-201ENST00000434069 851 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AL590399.6-201ENST00000446396 307 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 RPL5P24-201ENST00000463742 885 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 RPS27AP1-201ENST00000475545 471 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 OR5H3P-201ENST00000502817 919 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 RN7SKP157-201ENST00000516174 282 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AC093331.1-201ENST00000521474 169 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AC004923.2-201ENST00000529649 369 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AC006518.1-201ENST00000541449 943 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AP003717.3-201ENST00000544832 1180 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 OR4T1P-201ENST00000554933 911 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AC074050.1-201ENST00000563247 211 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 MIR2682-201ENST00000580305 110 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 SNRPGP15-201ENST00000600149 222 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AL162713.1-201ENST00000604480 262 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 HMGN2P28-201ENST00000606102 262 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AC006133.1-201ENST00000617106 264 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.24□□□□□ -1.89
TREX1Q9NSU2 AL136164.4-201ENST00000625013 2135 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 RNU1-85P-201ENST00000364127 164 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 SNORA62.3-201ENST00000365110 153 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 MIR200C-201ENST00000384980 68 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 SNORA48.8-201ENST00000391324 134 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 RNU2-65P-201ENST00000410162 185 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 RNA5SP44-201ENST00000410446 133 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 RPS7P15-201ENST00000415804 584 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC244098.2-201ENST00000422068 99 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 OR51AB1P-201ENST00000429046 620 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 RPL37P1-201ENST00000432310 284 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC097499.1-201ENST00000444277 208 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AL513343.1-201ENST00000451818 792 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 BX276092.4-201ENST00000452056 248 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 MTND3P4-201ENST00000453537 303 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 RPL23AP55-201ENST00000498163 452 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC010265.1-201ENST00000513509 211 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.23□□□□□ -1.89
TREX1Q9NSU2 RN7SKP289-201ENST00000517244 295 ntBASIC3.23□□□□□ -1.89
TREX1Q9NSU2 COX6B1P6-201ENST00000522347 255 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms