Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 uc_338.32-201ENST00000615087 172 ntBASIC4.12□□□□□ -1.75
PKP4Q99569 SNX18P1Y-201ENST00000616231 511 ntBASIC4.12□□□□□ -1.75
PKP4Q99569 MIR4278-201ENST00000636094 69 ntBASIC4.12□□□□□ -1.75
PKP4Q99569 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.12□□□□□ -1.75
PKP4Q99569 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.12□□□□□ -1.75
PKP4Q99569 MTND4P4-201ENST00000439033 1366 ntBASIC4.12□□□□□ -1.75
PKP4Q99569 AP005901.5-201ENST00000545779 1796 ntBASIC4.12□□□□□ -1.75
PKP4Q99569 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PKP4Q99569 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.12□□□□□ -1.75
PKP4Q99569 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PKP4Q99569 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PKP4Q99569 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PKP4Q99569 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.11□□□□□ -1.75
PKP4Q99569 AP000776.1-201ENST00000530032 1663 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PKP4Q99569 AC016716.1-201ENST00000265882 708 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PKP4Q99569 AC126755.2-208ENST00000327792 462 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 AC138969.1-213ENST00000331436 462 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 RNU6-1243P-201ENST00000364028 107 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 RNA5SP366-201ENST00000365454 123 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PKP4Q99569 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PKP4Q99569 AL078595.1-201ENST00000404458 226 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.11□□□□□ -1.75
PKP4Q99569 RPL23AP26-201ENST00000412728 464 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.11□□□□□ -1.75
PKP4Q99569 AL139421.1-201ENST00000423010 169 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.11□□□□□ -1.75
PKP4Q99569 MTCO1P3-201ENST00000429327 192 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 AC016712.1-201ENST00000431088 378 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.11□□□□□ -1.75
PKP4Q99569 AC129850.1-201ENST00000436203 508 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 HLA-N-201ENST00000437516 135 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 MTND3P1-201ENST00000441336 220 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 MTCYBP3-201ENST00000445588 1137 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PKP4Q99569 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.11□□□□□ -1.75
PKP4Q99569 HMGB3P30-201ENST00000457863 606 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.11□□□□□ -1.75
PKP4Q99569 BNIP3P41-201ENST00000503774 571 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 PARP4P3-201ENST00000510265 317 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 AC116353.3-201ENST00000511215 249 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 KCTD9P2-201ENST00000512203 1013 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.11□□□□□ -1.75
PKP4Q99569 FTH1P9-201ENST00000513251 355 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.11□□□□□ -1.75
PKP4Q99569 AC016065.2-201ENST00000514530 444 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PKP4Q99569 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.11□□□□□ -1.75
PKP4Q99569 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.11□□□□□ -1.75
PKP4Q99569 ACTR3BP3-201ENST00000565577 979 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 AC079171.1-201ENST00000568788 914 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 MIR4999-201ENST00000585029 91 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 BNIP3P26-201ENST00000600827 554 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 AC068790.6-201ENST00000602558 258 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 AC121761.2-201ENST00000617300 689 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.11□□□□□ -1.75
PKP4Q99569 C2orf27A-204ENST00000623058 969 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.11□□□□□ -1.75
PKP4Q99569 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.11□□□□□ -1.75
PKP4Q99569 AC106871.1-201ENST00000568324 3102 ntBASIC4.11□□□□□ -1.75
PKP4Q99569 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.11□□□□□ -1.75
PKP4Q99569 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PKP4Q99569 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.11□□□□□ -1.75
PKP4Q99569 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PKP4Q99569 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PKP4Q99569 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
PKP4Q99569 RNU6-707P-201ENST00000364647 95 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 RNU6-192P-201ENST00000391253 100 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 AL161909.1-201ENST00000397390 712 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 MIR1179-201ENST00000408703 91 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 Y_RNA.599-201ENST00000410489 109 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.1□□□□□ -1.75
PKP4Q99569 AC008280.1-201ENST00000418851 412 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 CYP4F29P-201ENST00000420685 446 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 CHIAP3-201ENST00000423668 1133 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 RPS3AP44-201ENST00000425466 790 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.1□□□□□ -1.75
PKP4Q99569 AL009174.1-201ENST00000426577 416 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 OR51AB1P-201ENST00000429046 620 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 YWHAZP8-201ENST00000436935 731 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.1□□□□□ -1.75
PKP4Q99569 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.1□□□□□ -1.75
PKP4Q99569 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.1□□□□□ -1.75
PKP4Q99569 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.1□□□□□ -1.75
PKP4Q99569 RPL23AP76-201ENST00000441860 458 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 RPS26P30-201ENST00000443431 335 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 AL606662.1-201ENST00000445763 553 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 AL360221.1-201ENST00000445989 335 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.1□□□□□ -1.75
PKP4Q99569 AL590399.6-201ENST00000446396 307 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.1□□□□□ -1.75
PKP4Q99569 RPL21P134-201ENST00000453468 483 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.1□□□□□ -1.75
PKP4Q99569 GAPDHP36-201ENST00000480688 918 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 AC078817.1-201ENST00000492623 435 ntBASIC4.1□□□□□ -1.75
PKP4Q99569 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.1□□□□□ -1.75
PKP4Q99569 AC104090.1-201ENST00000506341 1171 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms