Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SNORD51-201ENST00000384320 80 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 SNRPEP2-201ENST00000397592 279 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 RNA5SP80-201ENST00000410475 111 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 P2RY10P2-201ENST00000416730 913 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AL050321.1-201ENST00000432363 400 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 MTND2P19-201ENST00000449129 1012 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 RPL36AP13-201ENST00000457490 317 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 MTND2P28-201ENST00000457540 1044 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC010285.1-201ENST00000470580 392 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 RN7SL810P-201ENST00000493031 276 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 HMGB1P28-201ENST00000507778 552 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 TPT1P8-201ENST00000510120 555 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC010625.1-201ENST00000511296 403 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC026412.2-201ENST00000512270 1075 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC008837.2-201ENST00000513076 418 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 RNU6-27P-201ENST00000516146 107 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC104986.1-201ENST00000517978 436 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 MTND1P6-201ENST00000523621 946 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 GNRHR2P1-201ENST00000555315 631 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 RN7SL339P-201ENST00000580597 296 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC012417.1-201ENST00000582307 1039 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AP001269.3-201ENST00000588718 329 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 BNIP3P40-201ENST00000596017 556 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC055876.5-201ENST00000605667 259 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC080013.4-201ENST00000607624 649 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 MIR486-1-201ENST00000612171 68 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 FAM27D1-201ENST00000612308 341 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC048347.1-201ENST00000624621 427 ntBASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS33AQ96AX1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
VPS33AQ96AX1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.9□□□□□ -1.78
VPS33AQ96AX1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VPS33AQ96AX1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
VPS33AQ96AX1 AC099786.3-201ENST00000565735 1410 ntBASIC3.9□□□□□ -1.78
VPS33AQ96AX1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
VPS33AQ96AX1 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 RNU4-92P-201ENST00000363783 136 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 RNU6-1122P-201ENST00000384449 107 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 RNU6-584P-201ENST00000410350 95 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC068533.2-201ENST00000411872 306 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC099677.1-201ENST00000420575 175 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AL365396.1-201ENST00000430854 671 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 VDAC1P3-201ENST00000434069 851 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 RPL23AP46-201ENST00000438548 490 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC006011.1-201ENST00000442758 349 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC092155.2-201ENST00000454675 477 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 RPL21P104-201ENST00000464143 478 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 VN1R17P-201ENST00000472048 1090 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 RPL35P6-201ENST00000490024 372 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC114981.1-201ENST00000503897 678 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 RN7SKP244-201ENST00000516513 307 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 RNA5SP143-201ENST00000516936 115 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 HSPA8P13-201ENST00000523715 472 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC105233.3-201ENST00000531125 744 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AL139174.1-201ENST00000531489 886 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AL132857.1-201ENST00000555180 708 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AL133457.1-201ENST00000564251 987 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 ZNF192P1-203ENST00000565888 810 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC114878.2-201ENST00000604863 1251 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AL451044.1-201ENST00000604867 238 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AL034351.1-201ENST00000605288 668 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 AC106052.1-201ENST00000608029 497 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 Mico1.1-201ENST00000611698 204 ntBASIC3.9□□□□□ -1.79
VPS33AQ96AX1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
VPS33AQ96AX1 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms