Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 RPL7AP69-201ENST00000595306 806 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AC011890.2-201ENST00000613393 294 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AL589994.2-201ENST00000621124 579 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AL596275.2-204ENST00000641628 552 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AL596275.2-206ENST00000641957 626 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 AC090337.1-201ENST00000579651 2074 ntBASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
DEPDC4Q8N2C3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 RN7SKP130-201ENST00000364924 301 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 Y_RNA.364-201ENST00000365532 101 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 RPL23AP17-201ENST00000401064 499 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AL139184.1-202ENST00000422303 222 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AL389925.1-201ENST00000432257 728 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 NRBF2P3-201ENST00000432731 865 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 MED28P3-201ENST00000444288 531 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 RN7SL168P-201ENST00000463821 279 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AC058823.1-201ENST00000485315 474 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 RN7SL655P-201ENST00000486087 298 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 CYCSP27-201ENST00000527643 293 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AP003385.6-201ENST00000531603 374 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 DYNLL1P4-201ENST00000549314 266 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AC079600.1-201ENST00000550326 297 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 TVP23CP2-201ENST00000571473 623 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AP001823.1-201ENST00000604056 1003 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AL670379.4-201ENST00000605279 254 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AC010680.4-201ENST00000605334 543 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 ATP1B3P1-201ENST00000605365 821 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AC005014.2-201ENST00000607795 599 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 MIR6128-201ENST00000615528 109 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AC007792.1-201ENST00000623023 402 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
DEPDC4Q8N2C3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.96□□□□□ -1.45
DEPDC4Q8N2C3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
DEPDC4Q8N2C3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.45
DEPDC4Q8N2C3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
DEPDC4Q8N2C3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
DEPDC4Q8N2C3 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 RNU6-989P-201ENST00000362756 107 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 RNA5SP382-201ENST00000363355 112 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 RNU6-702P-201ENST00000364982 107 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AC092634.1-201ENST00000366505 199 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AC013442.1-201ENST00000397347 228 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 RNA5SP56-201ENST00000410277 118 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 RNU4-6P-201ENST00000410804 122 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 RN7SKP91-201ENST00000410852 288 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 E2F6P2-201ENST00000420708 748 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AL160004.2-201ENST00000432935 350 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 RPL12P49-201ENST00000441100 121 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 REG1CP-206ENST00000447469 496 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AC010631.1-201ENST00000474150 156 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AC026801.1-201ENST00000497178 464 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AC009567.2-201ENST00000502989 349 ntBASIC5.96□□□□□ -1.46
DEPDC4Q8N2C3 AC093816.1-201ENST00000515076 913 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms