Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AL138976.2-201ENST00000563989 694 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC034105.3-201ENST00000565294 442 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC007342.5-201ENST00000571340 2142 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 MIR4504-201ENST00000577413 92 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC044792.1-201ENST00000593294 196 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC068790.5-201ENST00000602741 355 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AL162413.1-201ENST00000603198 110 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC007621.1-201ENST00000604544 437 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AL162431.4-201ENST00000604674 411 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC090510.2-201ENST00000617465 629 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 MIR6730-201ENST00000622213 67 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AP006248.2-201ENST00000623309 592 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC024614.3-201ENST00000637860 256 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AC006206.1-201ENST00000544842 3387 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 PANDAR-201ENST00000629595 1506 ntBASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM48Q8IWZ4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 XPOTP1-201ENST00000443317 2398 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 Y_RNA.279-201ENST00000364763 95 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 SNORA11B-201ENST00000408175 129 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 RNU2-8P-201ENST00000410727 190 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AC096632.1-201ENST00000427395 310 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AL035410.1-201ENST00000427409 427 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 RPL19P16-201ENST00000433839 588 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 RPL23AP74-201ENST00000437246 471 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 HSPE1P28-201ENST00000443139 211 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AC243772.1-201ENST00000451620 410 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AL354710.1-201ENST00000453641 246 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 PABPC1P3-201ENST00000469174 459 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AL136126.1-201ENST00000473603 402 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AC079382.1-201ENST00000493346 557 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 RN7SKP147-201ENST00000517154 244 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 OR5AN2P-201ENST00000534535 896 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AC127024.5-201ENST00000580085 462 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 MIR3118-1-201ENST00000581787 76 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AC011447.4-201ENST00000587562 111 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AC011468.4-201ENST00000603942 409 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AC007038.2-201ENST00000608095 740 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AC007497.1-201ENST00000610421 561 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AC010632.3-201ENST00000611377 369 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 FER-210ENST00000628534 558 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AC097504.1-201ENST00000515103 2415 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 SMG1P4-204ENST00000523028 4131 ntBASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TRIM48Q8IWZ4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 ADAM5-202ENST00000399789 1942 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 LINC00622-201ENST00000562811 1570 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 AC108467.2-201ENST00000617640 1597 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 OR52B1P-201ENST00000316506 909 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 RNU4-73P-201ENST00000363164 141 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 XGY1-201ENST00000381172 446 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 RNU6-1293P-201ENST00000384077 107 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 Y_RNA.481-201ENST00000384373 102 ntBASIC5.05□□□□□ -1.6
TRIM48Q8IWZ4 RNU6-456P-201ENST00000384493 107 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms