Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AC093909.5-201ENST00000621839 1799 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 SNORA62.1-201ENST00000364287 154 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 MT-TW-201ENST00000387382 68 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 MIR454-201ENST00000390180 115 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 RNU6-823P-201ENST00000391042 103 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 NDUFS5P1-201ENST00000405668 289 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AC012065.2-201ENST00000421295 375 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 MTATP6P16-201ENST00000434543 526 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AC003989.1-201ENST00000434569 565 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 ATP5LP2-201ENST00000440646 311 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AC034222.1-201ENST00000494052 532 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 RNU6-138P-201ENST00000515952 107 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 SCARNA5-201ENST00000516201 276 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 RNA5SP400-201ENST00000517155 111 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AP003497.1-201ENST00000528472 562 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 LSM3P2-201ENST00000551246 273 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AC126615.2-201ENST00000553003 515 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 HSPE1P3-201ENST00000559254 309 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 MIR3146-201ENST00000580367 79 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AL713866.2-201ENST00000603579 219 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 U6.101-201ENST00000637707 76 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AC008013.2-202ENST00000637965 364 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 AC010615.1-201ENST00000594254 1764 ntBASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
FOXR1Q6PIV2 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 RN7SKP185-201ENST00000362813 326 ntBASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 RNU6-984P-201ENST00000363236 109 ntBASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 SNORA51.1-201ENST00000363243 140 ntBASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 RNU4-7P-201ENST00000364758 141 ntBASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 Y_RNA.404-201ENST00000383978 102 ntBASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 RNU6-187P-201ENST00000384139 106 ntBASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 RPL23AP4-201ENST00000427757 463 ntBASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 AL445466.1-201ENST00000448432 357 ntBASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 RPS15AP1-201ENST00000457423 391 ntBASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 SNORD127-201ENST00000458892 86 ntBASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXR1Q6PIV2 AC011005.3-201ENST00000491624 395 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms