Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
RPL39P62891 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.81□□□□□ -2.12
RPL39P62891 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
RPL39P62891 AC011503.2-201ENST00000594230 1500 ntBASIC1.81□□□□□ -2.12
RPL39P62891 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.81□□□□□ -2.12
RPL39P62891 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RPL39P62891 TAB3P1-202ENST00000452645 1634 ntBASIC1.8□□□□□ -2.12
RPL39P62891 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPL39P62891 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
RPL39P62891 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
RPL39P62891 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC1.8□□□□□ -2.12
RPL39P62891 MIR422A-201ENST00000362286 90 ntBASIC1.8□□□□□ -2.12
RPL39P62891 SNORA38.1-201ENST00000364172 131 ntBASIC1.8□□□□□ -2.12
RPL39P62891 OR52E6-202ENST00000379946 954 ntBASIC1.8□□□□□ -2.12
RPL39P62891 MIR591-201ENST00000385290 95 ntBASIC1.8□□□□□ -2.12
RPL39P62891 SEPT7P2-202ENST00000398921 823 ntBASIC1.8□□□□□ -2.12
RPL39P62891 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPL39P62891 RPL7P10-201ENST00000417407 739 ntBASIC1.8□□□□□ -2.12
RPL39P62891 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC1.8□□□□□ -2.12
RPL39P62891 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC1.8□□□□□ -2.12
RPL39P62891 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC1.8□□□□□ -2.12
RPL39P62891 HSPE1P28-201ENST00000443139 211 ntBASIC1.8□□□□□ -2.12
RPL39P62891 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC1.8□□□□□ -2.12
RPL39P62891 PRSS3P4-201ENST00000453323 162 ntBASIC1.8□□□□□ -2.12
RPL39P62891 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.8□□□□□ -2.12
RPL39P62891 AC008280.2-201ENST00000455473 307 ntBASIC1.8□□□□□ -2.12
RPL39P62891 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.8□□□□□ -2.12
RPL39P62891 RN7SL807P-201ENST00000470923 297 ntBASIC1.8□□□□□ -2.12
RPL39P62891 AC093663.2-201ENST00000484625 313 ntBASIC1.8□□□□□ -2.12
RPL39P62891 SAP18P1-201ENST00000512058 390 ntBASIC1.8□□□□□ -2.12
RPL39P62891 AC023141.12-201ENST00000512399 199 ntBASIC1.8□□□□□ -2.12
RPL39P62891 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC1.8□□□□□ -2.12
RPL39P62891 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.8□□□□□ -2.12
RPL39P62891 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC1.8□□□□□ -2.12
RPL39P62891 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.8□□□□□ -2.12
RPL39P62891 AC128657.1-201ENST00000549459 145 ntBASIC1.8□□□□□ -2.12
RPL39P62891 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC1.8□□□□□ -2.12
RPL39P62891 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.8□□□□□ -2.12
RPL39P62891 CYCSP39-201ENST00000565821 309 ntBASIC1.8□□□□□ -2.12
RPL39P62891 AC119501.1-201ENST00000603646 475 ntBASIC1.8□□□□□ -2.12
RPL39P62891 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.8□□□□□ -2.12
RPL39P62891 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC1.8□□□□□ -2.12
RPL39P62891 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.8□□□□□ -2.12
RPL39P62891 CYP3A51P-201ENST00000633513 256 ntBASIC1.8□□□□□ -2.12
RPL39P62891 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RPL39P62891 AL356317.1-201ENST00000396110 1436 ntBASIC1.8□□□□□ -2.12
RPL39P62891 POMP-202ENST00000460403 1428 ntTSL 3 BASIC1.8□□□□□ -2.12
RPL39P62891 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RPL39P62891 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
RPL39P62891 AC017002.4-201ENST00000604721 1525 ntBASIC1.8□□□□□ -2.12
RPL39P62891 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RPL39P62891 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
RPL39P62891 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPL39P62891 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
RPL39P62891 AL592437.2-201ENST00000421655 2434 ntBASIC1.79□□□□□ -2.12
RPL39P62891 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RPL39P62891 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.79□□□□□ -2.12
RPL39P62891 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RPL39P62891 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.79□□□□□ -2.12
RPL39P62891 RNVU1-14-201ENST00000384770 164 ntBASIC1.79□□□□□ -2.12
RPL39P62891 MIR134-201ENST00000385258 73 ntBASIC1.79□□□□□ -2.12
RPL39P62891 SAR1AP2-201ENST00000392696 594 ntBASIC1.79□□□□□ -2.12
RPL39P62891 AL356057.3-201ENST00000402607 340 ntBASIC1.79□□□□□ -2.12
RPL39P62891 AL138885.1-201ENST00000405921 675 ntBASIC1.79□□□□□ -2.12
RPL39P62891 HMGB1P13-201ENST00000406019 642 ntBASIC1.79□□□□□ -2.12
RPL39P62891 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.79□□□□□ -2.12
RPL39P62891 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC1.79□□□□□ -2.12
RPL39P62891 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.79□□□□□ -2.12
RPL39P62891 AC090543.1-201ENST00000492168 485 ntBASIC1.79□□□□□ -2.12
RPL39P62891 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.79□□□□□ -2.12
RPL39P62891 AC010374.2-201ENST00000512933 535 ntBASIC1.79□□□□□ -2.12
RPL39P62891 RNA5SP282-201ENST00000516355 108 ntBASIC1.79□□□□□ -2.12
RPL39P62891 SNORA31.21-201ENST00000517180 77 ntBASIC1.79□□□□□ -2.12
RPL39P62891 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.79□□□□□ -2.12
RPL39P62891 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.79□□□□□ -2.12
RPL39P62891 AL121603.1-201ENST00000553815 142 ntBASIC1.79□□□□□ -2.12
RPL39P62891 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.79□□□□□ -2.12
RPL39P62891 AC034105.4-201ENST00000568304 277 ntBASIC1.79□□□□□ -2.12
RPL39P62891 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC1.79□□□□□ -2.12
RPL39P62891 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC1.79□□□□□ -2.12
RPL39P62891 AL645568.2-201ENST00000432815 1337 ntBASIC1.79□□□□□ -2.12
RPL39P62891 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RPL39P62891 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RPL39P62891 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC1.79□□□□□ -2.12
RPL39P62891 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
RPL39P62891 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RPL39P62891 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RPL39P62891 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RPL39P62891 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC1.78□□□□□ -2.12
RPL39P62891 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.78□□□□□ -2.12
RPL39P62891 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RPL39P62891 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RPL39P62891 RNU1-51P-201ENST00000365345 176 ntBASIC1.78□□□□□ -2.12
RPL39P62891 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RPL39P62891 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.78□□□□□ -2.12
RPL39P62891 SNORA9-201ENST00000384215 133 ntBASIC1.78□□□□□ -2.12
RPL39P62891 MIR449B-201ENST00000384995 97 ntBASIC1.78□□□□□ -2.12
RPL39P62891 AL050305.1-201ENST00000399993 1230 ntBASIC1.78□□□□□ -2.12
RPL39P62891 RNA5SP21-201ENST00000410917 96 ntBASIC1.78□□□□□ -2.12
RPL39P62891 AC016769.2-201ENST00000414815 475 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms