Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 DBIP2-201ENST00000419076 262 ntBASIC3.36□□□□□ -1.87
LIM2P55344 SFR1P2-201ENST00000421841 730 ntBASIC3.36□□□□□ -1.87
LIM2P55344 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.36□□□□□ -1.87
LIM2P55344 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.36□□□□□ -1.87
LIM2P55344 PTGES3P1-201ENST00000439531 483 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.36□□□□□ -1.87
LIM2P55344 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.36□□□□□ -1.87
LIM2P55344 Z99714.1-201ENST00000450463 807 ntBASIC3.36□□□□□ -1.87
LIM2P55344 MRPS31P2-201ENST00000451581 518 ntBASIC3.36□□□□□ -1.87
LIM2P55344 BX276092.4-201ENST00000452056 248 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AC073387.1-201ENST00000453261 709 ntBASIC3.36□□□□□ -1.87
LIM2P55344 RPL37P6-202ENST00000464216 403 ntBASIC3.36□□□□□ -1.87
LIM2P55344 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.36□□□□□ -1.87
LIM2P55344 AC084357.1-201ENST00000473404 255 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AC087879.1-201ENST00000474343 374 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AC106707.2-201ENST00000484182 374 ntBASIC3.36□□□□□ -1.87
LIM2P55344 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LIM2P55344 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.36□□□□□ -1.87
LIM2P55344 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.36□□□□□ -1.87
LIM2P55344 AC026784.1-201ENST00000507986 352 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AC008837.1-201ENST00000511513 412 ntBASIC3.36□□□□□ -1.87
LIM2P55344 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.36□□□□□ -1.87
LIM2P55344 RNU6-202P-201ENST00000515998 96 ntBASIC3.36□□□□□ -1.87
LIM2P55344 RN7SKP277-201ENST00000516895 283 ntBASIC3.36□□□□□ -1.87
LIM2P55344 RNA5SP135-201ENST00000517019 125 ntBASIC3.36□□□□□ -1.87
LIM2P55344 RNU6-1028P-201ENST00000517164 93 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.36□□□□□ -1.87
LIM2P55344 AP006245.1-201ENST00000522549 120 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AP001207.1-201ENST00000524051 481 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LIM2P55344 OR8L1P-201ENST00000534005 955 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.36□□□□□ -1.87
LIM2P55344 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.36□□□□□ -1.87
LIM2P55344 EIF5A2P1-201ENST00000564027 460 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AC006116.10-201ENST00000591836 581 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AP001542.2-201ENST00000593141 364 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AC112503.1-201ENST00000608436 391 ntBASIC3.36□□□□□ -1.87
LIM2P55344 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.36□□□□□ -1.87
LIM2P55344 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.36□□□□□ -1.87
LIM2P55344 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.36□□□□□ -1.87
LIM2P55344 AC009093.8-201ENST00000641769 292 ntBASIC3.36□□□□□ -1.87
LIM2P55344 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LIM2P55344 MTND4P9-201ENST00000507819 1346 ntBASIC3.36□□□□□ -1.87
LIM2P55344 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LIM2P55344 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LIM2P55344 ELL2P4-201ENST00000446870 1376 ntBASIC3.36□□□□□ -1.87
LIM2P55344 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.36□□□□□ -1.87
LIM2P55344 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
LIM2P55344 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LIM2P55344 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
LIM2P55344 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LIM2P55344 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LIM2P55344 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LIM2P55344 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LIM2P55344 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LIM2P55344 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.35□□□□□ -1.87
LIM2P55344 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LIM2P55344 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LIM2P55344 RNA5SP235-201ENST00000365411 114 ntBASIC3.35□□□□□ -1.87
LIM2P55344 OR1L1-202ENST00000373686 1083 ntBASIC3.35□□□□□ -1.87
LIM2P55344 MIR153-1-201ENST00000384914 90 ntBASIC3.35□□□□□ -1.87
LIM2P55344 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
LIM2P55344 RN7SKP53-201ENST00000411337 315 ntBASIC3.35□□□□□ -1.87
LIM2P55344 AC069218.2-201ENST00000411665 344 ntBASIC3.35□□□□□ -1.87
LIM2P55344 MTND4P22-201ENST00000413116 1169 ntBASIC3.35□□□□□ -1.87
LIM2P55344 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.35□□□□□ -1.87
LIM2P55344 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.35□□□□□ -1.87
LIM2P55344 CYCSP4-201ENST00000429682 331 ntBASIC3.35□□□□□ -1.87
LIM2P55344 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.35□□□□□ -1.87
LIM2P55344 AC010881.1-201ENST00000433830 235 ntBASIC3.35□□□□□ -1.87
LIM2P55344 GOT2P5-201ENST00000433995 546 ntBASIC3.35□□□□□ -1.87
LIM2P55344 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.35□□□□□ -1.87
LIM2P55344 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.35□□□□□ -1.87
LIM2P55344 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.35□□□□□ -1.87
LIM2P55344 AC244505.3-201ENST00000454598 187 ntBASIC3.35□□□□□ -1.87
LIM2P55344 SNORD108-201ENST00000459332 71 ntBASIC3.35□□□□□ -1.87
LIM2P55344 ACTG1P13-201ENST00000486987 1043 ntBASIC3.35□□□□□ -1.87
LIM2P55344 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LIM2P55344 RNF138P1-201ENST00000502765 546 ntBASIC3.35□□□□□ -1.87
LIM2P55344 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.35□□□□□ -1.87
LIM2P55344 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.35□□□□□ -1.87
LIM2P55344 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.35□□□□□ -1.87
LIM2P55344 TMEM248P1-201ENST00000510579 951 ntBASIC3.35□□□□□ -1.87
LIM2P55344 AC018797.3-201ENST00000513388 1241 ntBASIC3.35□□□□□ -1.87
LIM2P55344 MTATP6P9-201ENST00000515039 680 ntBASIC3.35□□□□□ -1.87
LIM2P55344 RNU2-27P-201ENST00000516185 142 ntBASIC3.35□□□□□ -1.87
LIM2P55344 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.35□□□□□ -1.87
LIM2P55344 AC026403.1-201ENST00000518938 295 ntBASIC3.35□□□□□ -1.87
LIM2P55344 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.35□□□□□ -1.87
LIM2P55344 ARL2BPP5-201ENST00000523141 481 ntBASIC3.35□□□□□ -1.87
LIM2P55344 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.35□□□□□ -1.87
LIM2P55344 AL034351.1-201ENST00000605288 668 ntBASIC3.35□□□□□ -1.87
LIM2P55344 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.35□□□□□ -1.87
LIM2P55344 AC097504.2-201ENST00000608088 454 ntBASIC3.35□□□□□ -1.87
LIM2P55344 AL136370.1-201ENST00000608166 691 ntBASIC3.35□□□□□ -1.87
LIM2P55344 AF129408.1-201ENST00000608767 431 ntBASIC3.35□□□□□ -1.87
LIM2P55344 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.35□□□□□ -1.87
LIM2P55344 AC078899.5-201ENST00000612475 178 ntBASIC3.35□□□□□ -1.87
LIM2P55344 U4.6-201ENST00000621618 127 ntBASIC3.35□□□□□ -1.87
LIM2P55344 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms