Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL161713.1-201ENST00000555538 145 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS2P54868 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS2P54868 AC124283.4-201ENST00000581815 456 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AC012254.4-201ENST00000588843 273 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGCS2P54868 AL391834.2-201ENST00000609982 546 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.84□□□□□ -1.79
HMGCS2P54868 MIR486-1-201ENST00000612171 68 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 RMST_10.1-201ENST00000616309 154 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AC009269.6-201ENST00000621778 588 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.84□□□□□ -1.79
HMGCS2P54868 AC007529.1-201ENST00000418574 2178 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 MTND4P9-201ENST00000507819 1346 ntBASIC3.84□□□□□ -1.79
HMGCS2P54868 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGCS2P54868 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGCS2P54868 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGCS2P54868 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
HMGCS2P54868 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HMGCS2P54868 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.84□□□□□ -1.8
HMGCS2P54868 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
HMGCS2P54868 PNPT1P2-201ENST00000456768 2050 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.83□□□□□ -1.8
HMGCS2P54868 RNU6-452P-201ENST00000384406 107 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 RNU6-1257P-201ENST00000384625 110 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 RPL5P18-201ENST00000406671 891 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 MTND2P9-201ENST00000422293 931 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 AC093698.1-201ENST00000423843 571 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS2P54868 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS2P54868 ATP5C1P1-201ENST00000441945 895 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 NANOGNBP1-201ENST00000448444 480 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 FCF1P6-201ENST00000456841 595 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 RPL21P18-201ENST00000469899 480 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.83□□□□□ -1.8
HMGCS2P54868 RPS3AP50-201ENST00000487064 803 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 AC096576.1-201ENST00000489014 359 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS2P54868 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS2P54868 RPL23AP94-201ENST00000512518 302 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGCS2P54868 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS2P54868 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.83□□□□□ -1.8
HMGCS2P54868 AL121603.1-201ENST00000553815 142 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 AC090666.1-201ENST00000578241 445 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS2P54868 BNIP3P38-201ENST00000601117 544 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 AC068620.3-201ENST00000602749 560 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.83□□□□□ -1.8
HMGCS2P54868 AF129408.1-201ENST00000608767 431 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 AC245100.7-201ENST00000609678 442 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS2P54868 AL356321.1-201ENST00000621360 228 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 AC083865.1-201ENST00000636634 831 ntBASIC3.83□□□□□ -1.8
HMGCS2P54868 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS2P54868 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HMGCS2P54868 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS2P54868 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS2P54868 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGCS2P54868 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGCS2P54868 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HMGCS2P54868 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCS2P54868 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGCS2P54868 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCS2P54868 AL513302.2-201ENST00000562313 1842 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HMGCS2P54868 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCS2P54868 RNU1-18P-201ENST00000363062 164 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.82□□□□□ -1.8
HMGCS2P54868 Y_RNA.510-201ENST00000384511 114 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 MIR620-201ENST00000385232 95 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 AC007899.1-201ENST00000412776 775 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 AC013262.1-201ENST00000426710 252 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 FO393419.3-201ENST00000428741 282 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 RPL23AP69-201ENST00000431134 458 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.82□□□□□ -1.8
HMGCS2P54868 SKP1P1-201ENST00000438081 489 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 MED6P1-201ENST00000439659 713 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 MTND2P8-201ENST00000450555 1025 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCS2P54868 AL645939.1-201ENST00000453429 797 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 AL121877.1-201ENST00000453704 622 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 UBE2DNL-203ENST00000474922 222 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGCS2P54868 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 AC119751.4-201ENST00000507498 357 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.82□□□□□ -1.8
HMGCS2P54868 SNORA70.19-201ENST00000516717 90 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.82□□□□□ -1.8
HMGCS2P54868 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGCS2P54868 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGCS2P54868 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
HMGCS2P54868 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGCS2P54868 AP003117.1-201ENST00000602771 554 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 AC018618.2-201ENST00000604770 446 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.82□□□□□ -1.8
HMGCS2P54868 AC008759.3-201ENST00000613300 508 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 ATP5A1P2-202ENST00000616464 443 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 AC093875.1-201ENST00000623688 504 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms