Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 SNORD109A-201ENST00000459128 67 ntBASIC4.2□□□□□ -1.74
MSH6P52701 SCGB1D5P-201ENST00000515134 247 ntBASIC4.2□□□□□ -1.74
MSH6P52701 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.2□□□□□ -1.74
MSH6P52701 AC079600.2-201ENST00000550076 130 ntBASIC4.2□□□□□ -1.74
MSH6P52701 TGIF1P1-201ENST00000558095 802 ntBASIC4.2□□□□□ -1.74
MSH6P52701 MIR4644-201ENST00000579929 84 ntBASIC4.2□□□□□ -1.74
MSH6P52701 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.2□□□□□ -1.74
MSH6P52701 AL135786.2-201ENST00000608422 615 ntBASIC4.2□□□□□ -1.74
MSH6P52701 AC004241.3-201ENST00000611728 517 ntBASIC4.2□□□□□ -1.74
MSH6P52701 AC008121.2-201ENST00000614647 523 ntBASIC4.2□□□□□ -1.74
MSH6P52701 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.2□□□□□ -1.74
MSH6P52701 SPATA2P1-201ENST00000431223 2055 ntBASIC4.2□□□□□ -1.74
MSH6P52701 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
MSH6P52701 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
MSH6P52701 AC073325.2-201ENST00000339545 159 ntBASIC4.19□□□□□ -1.74
MSH6P52701 RNU6-386P-201ENST00000362650 107 ntBASIC4.19□□□□□ -1.74
MSH6P52701 BMS1P22-201ENST00000414726 313 ntBASIC4.19□□□□□ -1.74
MSH6P52701 UBE2V2P3-201ENST00000433562 437 ntBASIC4.19□□□□□ -1.74
MSH6P52701 AL357520.1-201ENST00000441557 453 ntBASIC4.19□□□□□ -1.74
MSH6P52701 Z99127.3-201ENST00000448158 395 ntBASIC4.19□□□□□ -1.74
MSH6P52701 RPL12P26-201ENST00000452430 487 ntBASIC4.19□□□□□ -1.74
MSH6P52701 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.19□□□□□ -1.74
MSH6P52701 C1DP3-201ENST00000455013 423 ntBASIC4.19□□□□□ -1.74
MSH6P52701 AC117525.1-201ENST00000515228 503 ntBASIC4.19□□□□□ -1.74
MSH6P52701 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
MSH6P52701 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.19□□□□□ -1.74
MSH6P52701 AC011602.1-201ENST00000546484 331 ntBASIC4.19□□□□□ -1.74
MSH6P52701 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.19□□□□□ -1.74
MSH6P52701 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.19□□□□□ -1.74
MSH6P52701 AC009101.1-201ENST00000568135 242 ntBASIC4.19□□□□□ -1.74
MSH6P52701 GMCL1P2-201ENST00000605230 823 ntBASIC4.19□□□□□ -1.74
MSH6P52701 BNIP3P7-201ENST00000605641 516 ntBASIC4.19□□□□□ -1.74
MSH6P52701 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.19□□□□□ -1.74
MSH6P52701 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
MSH6P52701 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.19□□□□□ -1.74
MSH6P52701 ASNSP3-201ENST00000451989 1306 ntBASIC4.18□□□□□ -1.74
MSH6P52701 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH6P52701 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
MSH6P52701 MIR196B-201ENST00000384852 84 ntBASIC4.18□□□□□ -1.74
MSH6P52701 MIR184-201ENST00000384962 84 ntBASIC4.18□□□□□ -1.74
MSH6P52701 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.18□□□□□ -1.74
MSH6P52701 AC093084.1-201ENST00000424233 687 ntBASIC4.18□□□□□ -1.74
MSH6P52701 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.18□□□□□ -1.74
MSH6P52701 AL513328.1-201ENST00000446460 224 ntBASIC4.18□□□□□ -1.74
MSH6P52701 snoU13.26-201ENST00000459452 105 ntBASIC4.18□□□□□ -1.74
MSH6P52701 AP002884.2-201ENST00000471647 395 ntBASIC4.18□□□□□ -1.74
MSH6P52701 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.18□□□□□ -1.74
MSH6P52701 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.18□□□□□ -1.74
MSH6P52701 AC018797.3-201ENST00000513388 1241 ntBASIC4.18□□□□□ -1.74
MSH6P52701 AP001207.2-201ENST00000519490 539 ntBASIC4.18□□□□□ -1.74
MSH6P52701 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH6P52701 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.18□□□□□ -1.74
MSH6P52701 MIR4425-201ENST00000580572 84 ntBASIC4.18□□□□□ -1.74
MSH6P52701 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.18□□□□□ -1.74
MSH6P52701 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.18□□□□□ -1.74
MSH6P52701 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.18□□□□□ -1.74
MSH6P52701 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH6P52701 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MSH6P52701 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MSH6P52701 AC007342.9-201ENST00000623877 1385 ntBASIC4.18□□□□□ -1.74
MSH6P52701 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MSH6P52701 RNU1-87P-201ENST00000363727 170 ntBASIC4.17□□□□□ -1.74
MSH6P52701 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
MSH6P52701 MIR1183-201ENST00000408856 89 ntBASIC4.17□□□□□ -1.74
MSH6P52701 RANP4-201ENST00000413361 655 ntBASIC4.17□□□□□ -1.74
MSH6P52701 GLRXP1-201ENST00000423261 334 ntBASIC4.17□□□□□ -1.74
MSH6P52701 Z85994.2-201ENST00000434327 452 ntBASIC4.17□□□□□ -1.74
MSH6P52701 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.17□□□□□ -1.74
MSH6P52701 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.17□□□□□ -1.74
MSH6P52701 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.17□□□□□ -1.74
MSH6P52701 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.17□□□□□ -1.74
MSH6P52701 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
MSH6P52701 SEC11B-201ENST00000518383 499 ntBASIC4.17□□□□□ -1.74
MSH6P52701 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.17□□□□□ -1.74
MSH6P52701 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.17□□□□□ -1.74
MSH6P52701 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.17□□□□□ -1.74
MSH6P52701 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.17□□□□□ -1.74
MSH6P52701 AC024153.1-201ENST00000603103 365 ntBASIC4.17□□□□□ -1.74
MSH6P52701 AL391597.1-201ENST00000618707 694 ntBASIC4.17□□□□□ -1.74
MSH6P52701 AL133370.2-201ENST00000619934 439 ntBASIC4.17□□□□□ -1.74
MSH6P52701 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
MSH6P52701 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.17□□□□□ -1.74
MSH6P52701 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
MSH6P52701 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
MSH6P52701 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MSH6P52701 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MSH6P52701 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.17□□□□□ -1.74
MSH6P52701 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.17□□□□□ -1.74
MSH6P52701 AC087565.3-202ENST00000642085 1603 ntBASIC4.17□□□□□ -1.74
MSH6P52701 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
MSH6P52701 RNU4-7P-201ENST00000364758 141 ntBASIC4.16□□□□□ -1.74
MSH6P52701 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
MSH6P52701 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
MSH6P52701 MIR34A-201ENST00000385130 110 ntBASIC4.16□□□□□ -1.74
MSH6P52701 AL356057.1-202ENST00000402263 756 ntBASIC4.16□□□□□ -1.74
MSH6P52701 HSPD1P16-201ENST00000402302 394 ntBASIC4.16□□□□□ -1.74
MSH6P52701 NCSTNP1-201ENST00000406229 144 ntBASIC4.16□□□□□ -1.74
MSH6P52701 RNU2-52P-201ENST00000410680 190 ntBASIC4.16□□□□□ -1.74
MSH6P52701 BX679664.1-201ENST00000434429 253 ntBASIC4.16□□□□□ -1.74
MSH6P52701 RPL31P20-201ENST00000449593 360 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms