Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RNA5SP246-201ENST00000458909 119 ntBASIC4.36□□□□□ -1.71
RFC1P35251 SNORD108-201ENST00000459332 71 ntBASIC4.36□□□□□ -1.71
RFC1P35251 MTND1P16-201ENST00000465177 898 ntBASIC4.36□□□□□ -1.71
RFC1P35251 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFC1P35251 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.36□□□□□ -1.71
RFC1P35251 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
RFC1P35251 AC112198.1-201ENST00000505369 1220 ntBASIC4.36□□□□□ -1.71
RFC1P35251 AC025554.1-201ENST00000505641 188 ntBASIC4.36□□□□□ -1.71
RFC1P35251 AC017037.1-201ENST00000508460 471 ntBASIC4.36□□□□□ -1.71
RFC1P35251 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.36□□□□□ -1.71
RFC1P35251 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RFC1P35251 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.36□□□□□ -1.71
RFC1P35251 OR5M7P-201ENST00000526140 972 ntBASIC4.36□□□□□ -1.71
RFC1P35251 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.36□□□□□ -1.71
RFC1P35251 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.36□□□□□ -1.71
RFC1P35251 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.36□□□□□ -1.71
RFC1P35251 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.36□□□□□ -1.71
RFC1P35251 ISCA1P3-201ENST00000577104 373 ntBASIC4.36□□□□□ -1.71
RFC1P35251 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.36□□□□□ -1.71
RFC1P35251 AC022655.2-201ENST00000577280 318 ntBASIC4.36□□□□□ -1.71
RFC1P35251 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.36□□□□□ -1.71
RFC1P35251 AC018714.1-201ENST00000605028 208 ntBASIC4.36□□□□□ -1.71
RFC1P35251 AL354760.1-201ENST00000608357 643 ntBASIC4.36□□□□□ -1.71
RFC1P35251 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.36□□□□□ -1.71
RFC1P35251 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.36□□□□□ -1.71
RFC1P35251 AC005332.6-201ENST00000613178 446 ntBASIC4.36□□□□□ -1.71
RFC1P35251 AC122133.1-201ENST00000613964 233 ntBASIC4.36□□□□□ -1.71
RFC1P35251 AC026368.1-201ENST00000614934 690 ntBASIC4.36□□□□□ -1.71
RFC1P35251 RMST_9.1-201ENST00000619945 193 ntBASIC4.36□□□□□ -1.71
RFC1P35251 MIR4727-201ENST00000622232 55 ntBASIC4.36□□□□□ -1.71
RFC1P35251 AC091965.5-201ENST00000624785 342 ntBASIC4.36□□□□□ -1.71
RFC1P35251 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFC1P35251 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.36□□□□□ -1.71
RFC1P35251 DBF4P1-201ENST00000412976 1892 ntBASIC4.36□□□□□ -1.71
RFC1P35251 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.36□□□□□ -1.71
RFC1P35251 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.36□□□□□ -1.71
RFC1P35251 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.36□□□□□ -1.71
RFC1P35251 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFC1P35251 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RFC1P35251 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RFC1P35251 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
RFC1P35251 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFC1P35251 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RFC1P35251 AC126755.2-208ENST00000327792 462 ntBASIC4.35□□□□□ -1.71
RFC1P35251 AC138969.1-213ENST00000331436 462 ntBASIC4.35□□□□□ -1.71
RFC1P35251 Y_RNA.318-201ENST00000365131 97 ntBASIC4.35□□□□□ -1.71
RFC1P35251 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFC1P35251 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC1P35251 SNORD116-9-201ENST00000384000 95 ntBASIC4.35□□□□□ -1.71
RFC1P35251 SNORD116-3-201ENST00000384287 95 ntBASIC4.35□□□□□ -1.71
RFC1P35251 SNORD116-7-201ENST00000384404 95 ntBASIC4.35□□□□□ -1.71
RFC1P35251 SNORD116-5-201ENST00000384462 95 ntBASIC4.35□□□□□ -1.71
RFC1P35251 RNA5SP239-201ENST00000410218 129 ntBASIC4.35□□□□□ -1.71
RFC1P35251 RN7SKP177-201ENST00000410567 355 ntBASIC4.35□□□□□ -1.71
RFC1P35251 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC1P35251 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC1P35251 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC1P35251 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.35□□□□□ -1.71
RFC1P35251 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC1P35251 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.35□□□□□ -1.71
RFC1P35251 CHIAP3-201ENST00000423668 1133 ntBASIC4.35□□□□□ -1.71
RFC1P35251 RPP40P1-201ENST00000426762 456 ntBASIC4.35□□□□□ -1.71
RFC1P35251 AL513175.1-201ENST00000431492 780 ntBASIC4.35□□□□□ -1.71
RFC1P35251 AC010881.1-201ENST00000433830 235 ntBASIC4.35□□□□□ -1.71
RFC1P35251 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC1P35251 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RFC1P35251 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.35□□□□□ -1.71
RFC1P35251 AL591503.2-201ENST00000442314 1005 ntBASIC4.35□□□□□ -1.71
RFC1P35251 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.35□□□□□ -1.71
RFC1P35251 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC1P35251 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.35□□□□□ -1.71
RFC1P35251 PPIAP3-201ENST00000450588 505 ntBASIC4.35□□□□□ -1.71
RFC1P35251 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC1P35251 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC1P35251 RPL37P6-202ENST00000464216 403 ntBASIC4.35□□□□□ -1.71
RFC1P35251 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC1P35251 AP000926.1-201ENST00000479573 241 ntBASIC4.35□□□□□ -1.71
RFC1P35251 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.35□□□□□ -1.71
RFC1P35251 XKRY-201ENST00000510392 1100 ntBASIC4.35□□□□□ -1.71
RFC1P35251 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.35□□□□□ -1.71
RFC1P35251 HNRNPKP5-201ENST00000515300 253 ntBASIC4.35□□□□□ -1.71
RFC1P35251 SNORA48.10-201ENST00000516965 160 ntBASIC4.35□□□□□ -1.71
RFC1P35251 AP001189.2-201ENST00000527320 189 ntBASIC4.35□□□□□ -1.71
RFC1P35251 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RFC1P35251 AC007599.1-201ENST00000568688 1174 ntBASIC4.35□□□□□ -1.71
RFC1P35251 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.35□□□□□ -1.71
RFC1P35251 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RFC1P35251 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.35□□□□□ -1.71
RFC1P35251 AC017100.2-201ENST00000584628 355 ntBASIC4.35□□□□□ -1.71
RFC1P35251 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RFC1P35251 AC006539.2-201ENST00000601729 572 ntBASIC4.35□□□□□ -1.71
RFC1P35251 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.35□□□□□ -1.71
RFC1P35251 LARP1BP1-201ENST00000506036 1359 ntBASIC4.35□□□□□ -1.71
RFC1P35251 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFC1P35251 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFC1P35251 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RFC1P35251 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.35□□□□□ -1.71
RFC1P35251 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
RFC1P35251 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
RFC1P35251 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms