Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.41□□□□□ -1.7
BDNFP23560 RNU6-276P-201ENST00000516114 96 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AC100770.1-201ENST00000532310 322 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.41□□□□□ -1.7
BDNFP23560 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.41□□□□□ -1.7
BDNFP23560 TRAV15-201ENST00000556680 249 ntBASIC4.41□□□□□ -1.7
BDNFP23560 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.41□□□□□ -1.7
BDNFP23560 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.41□□□□□ -1.7
BDNFP23560 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.41□□□□□ -1.7
BDNFP23560 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.41□□□□□ -1.7
BDNFP23560 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.41□□□□□ -1.7
BDNFP23560 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.41□□□□□ -1.7
BDNFP23560 AL022067.1-201ENST00000602426 454 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AC110741.2-201ENST00000605278 268 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AC024257.5-201ENST00000612739 531 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AL355810.1-201ENST00000614629 552 ntBASIC4.41□□□□□ -1.7
BDNFP23560 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.41□□□□□ -1.7
BDNFP23560 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AC123767.1-202ENST00000620407 817 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AC010608.2-201ENST00000624830 470 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.41□□□□□ -1.7
BDNFP23560 U6.101-201ENST00000637707 76 ntBASIC4.41□□□□□ -1.7
BDNFP23560 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.41□□□□□ -1.7
BDNFP23560 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
BDNFP23560 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BDNFP23560 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BDNFP23560 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BDNFP23560 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BDNFP23560 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
BDNFP23560 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
BDNFP23560 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.4□□□□□ -1.7
BDNFP23560 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
BDNFP23560 RPL7P26-201ENST00000333817 754 ntBASIC4.4□□□□□ -1.71
BDNFP23560 RN7SKP263-201ENST00000411194 309 ntBASIC4.4□□□□□ -1.71
BDNFP23560 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.4□□□□□ -1.71
BDNFP23560 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.4□□□□□ -1.71
BDNFP23560 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.4□□□□□ -1.71
BDNFP23560 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BDNFP23560 AL590103.1-201ENST00000434488 307 ntBASIC4.4□□□□□ -1.71
BDNFP23560 MTCYBP34-201ENST00000439552 670 ntBASIC4.4□□□□□ -1.71
BDNFP23560 OFD1P3Y-201ENST00000453312 783 ntBASIC4.4□□□□□ -1.71
BDNFP23560 RPS23P3-201ENST00000470993 430 ntBASIC4.4□□□□□ -1.71
BDNFP23560 RN7SL604P-201ENST00000492589 296 ntBASIC4.4□□□□□ -1.71
BDNFP23560 AC096751.1-202ENST00000502691 1067 ntBASIC4.4□□□□□ -1.71
BDNFP23560 BNIP3P41-201ENST00000503774 571 ntBASIC4.4□□□□□ -1.71
BDNFP23560 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.4□□□□□ -1.71
BDNFP23560 RNU6-1095P-201ENST00000516148 108 ntBASIC4.4□□□□□ -1.71
BDNFP23560 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.4□□□□□ -1.71
BDNFP23560 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.4□□□□□ -1.71
BDNFP23560 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.4□□□□□ -1.71
BDNFP23560 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.4□□□□□ -1.71
BDNFP23560 AC084824.1-201ENST00000550917 1005 ntBASIC4.4□□□□□ -1.71
BDNFP23560 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.4□□□□□ -1.71
BDNFP23560 RPL23AP87-202ENST00000573039 466 ntBASIC4.4□□□□□ -1.71
BDNFP23560 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.4□□□□□ -1.71
BDNFP23560 BNIP3P27-201ENST00000599991 412 ntBASIC4.4□□□□□ -1.71
BDNFP23560 AL390240.1-201ENST00000612950 384 ntBASIC4.4□□□□□ -1.71
BDNFP23560 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.4□□□□□ -1.71
BDNFP23560 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.4□□□□□ -1.71
BDNFP23560 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BDNFP23560 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
BDNFP23560 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
BDNFP23560 RLIMP1-201ENST00000339626 1680 ntBASIC4.39□□□□□ -1.71
BDNFP23560 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
BDNFP23560 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.39□□□□□ -1.71
BDNFP23560 AP002001.2-201ENST00000529025 1469 ntBASIC4.39□□□□□ -1.71
BDNFP23560 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BDNFP23560 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BDNFP23560 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
BDNFP23560 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BDNFP23560 OR11H4-201ENST00000315409 1082 ntBASIC4.39□□□□□ -1.71
BDNFP23560 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BDNFP23560 VN1R8P-201ENST00000407739 893 ntBASIC4.39□□□□□ -1.71
BDNFP23560 HMGB3P23-201ENST00000414981 585 ntBASIC4.39□□□□□ -1.71
BDNFP23560 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.39□□□□□ -1.71
BDNFP23560 RPS23P10-201ENST00000416185 486 ntBASIC4.39□□□□□ -1.71
BDNFP23560 OR4K6P-201ENST00000416478 897 ntBASIC4.39□□□□□ -1.71
BDNFP23560 AL159169.1-201ENST00000421119 127 ntBASIC4.39□□□□□ -1.71
BDNFP23560 GTF2IP23-201ENST00000423746 351 ntBASIC4.39□□□□□ -1.71
BDNFP23560 PRELID3BP10-201ENST00000431957 584 ntBASIC4.39□□□□□ -1.71
BDNFP23560 HSFY6P-201ENST00000445573 403 ntBASIC4.39□□□□□ -1.71
BDNFP23560 SLC31A1P1-201ENST00000451221 567 ntBASIC4.39□□□□□ -1.71
BDNFP23560 AC079804.1-201ENST00000461922 436 ntBASIC4.39□□□□□ -1.71
BDNFP23560 AL049829.1-201ENST00000465411 156 ntBASIC4.39□□□□□ -1.71
BDNFP23560 OR4G11P-201ENST00000492842 939 ntBASIC4.39□□□□□ -1.71
BDNFP23560 STMN1P2-201ENST00000508435 439 ntBASIC4.39□□□□□ -1.71
BDNFP23560 AC093824.1-201ENST00000508796 343 ntBASIC4.39□□□□□ -1.71
BDNFP23560 SNORA31.8-201ENST00000516327 108 ntBASIC4.39□□□□□ -1.71
BDNFP23560 SNRPGP16-201ENST00000533275 226 ntBASIC4.39□□□□□ -1.71
BDNFP23560 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.39□□□□□ -1.71
BDNFP23560 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.39□□□□□ -1.71
BDNFP23560 RNU4-89P-201ENST00000607443 133 ntBASIC4.39□□□□□ -1.71
BDNFP23560 AL391261.4-201ENST00000616012 481 ntBASIC4.39□□□□□ -1.71
BDNFP23560 AC015967.1-201ENST00000619893 476 ntBASIC4.39□□□□□ -1.71
BDNFP23560 AC104985.3-201ENST00000623479 597 ntBASIC4.39□□□□□ -1.71
BDNFP23560 AC095031.1-201ENST00000623685 672 ntBASIC4.39□□□□□ -1.71
BDNFP23560 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.39□□□□□ -1.71
BDNFP23560 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BDNFP23560 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
BDNFP23560 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms