Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PRO1804-201ENST00000623780 2050 ntBASIC3.85□□□□□ -1.79
VCLP18206 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.85□□□□□ -1.79
VCLP18206 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VCLP18206 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.84□□□□□ -1.79
VCLP18206 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VCLP18206 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
VCLP18206 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.84□□□□□ -1.79
VCLP18206 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
VCLP18206 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
VCLP18206 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VCLP18206 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VCLP18206 Y_RNA.126-201ENST00000363382 111 ntBASIC3.84□□□□□ -1.79
VCLP18206 RN7SKP280-201ENST00000364196 304 ntBASIC3.84□□□□□ -1.79
VCLP18206 RNU6-213P-201ENST00000384051 104 ntBASIC3.84□□□□□ -1.79
VCLP18206 AL355143.1-201ENST00000407101 841 ntBASIC3.84□□□□□ -1.79
VCLP18206 AL023807.1-201ENST00000407932 359 ntBASIC3.84□□□□□ -1.79
VCLP18206 SNORA3.3-201ENST00000408712 125 ntBASIC3.84□□□□□ -1.79
VCLP18206 RPS7P9-201ENST00000414704 586 ntBASIC3.84□□□□□ -1.79
VCLP18206 USP9YP21-201ENST00000420603 432 ntBASIC3.84□□□□□ -1.79
VCLP18206 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.84□□□□□ -1.79
VCLP18206 SKP1P1-201ENST00000438081 489 ntBASIC3.84□□□□□ -1.79
VCLP18206 AC241584.1-201ENST00000438469 1241 ntBASIC3.84□□□□□ -1.79
VCLP18206 AC092393.1-201ENST00000439625 742 ntBASIC3.84□□□□□ -1.79
VCLP18206 RPS29P7-201ENST00000439662 171 ntBASIC3.84□□□□□ -1.79
VCLP18206 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.84□□□□□ -1.79
VCLP18206 RNF2P1-201ENST00000442955 1010 ntBASIC3.84□□□□□ -1.79
VCLP18206 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.84□□□□□ -1.79
VCLP18206 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.84□□□□□ -1.79
VCLP18206 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.84□□□□□ -1.79
VCLP18206 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.84□□□□□ -1.79
VCLP18206 MTCO3P2-201ENST00000457365 171 ntBASIC3.84□□□□□ -1.79
VCLP18206 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
VCLP18206 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VCLP18206 AC023141.12-201ENST00000512399 199 ntBASIC3.84□□□□□ -1.79
VCLP18206 NPM1P41-201ENST00000512920 831 ntBASIC3.84□□□□□ -1.79
VCLP18206 AC026402.1-201ENST00000513642 170 ntBASIC3.84□□□□□ -1.79
VCLP18206 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.84□□□□□ -1.79
VCLP18206 ZNF705CP-201ENST00000530515 889 ntBASIC3.84□□□□□ -1.79
VCLP18206 LRRC6P1-201ENST00000532188 885 ntBASIC3.84□□□□□ -1.79
VCLP18206 YPEL5P3-201ENST00000547227 352 ntBASIC3.84□□□□□ -1.79
VCLP18206 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.84□□□□□ -1.79
VCLP18206 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.84□□□□□ -1.79
VCLP18206 AC122134.1-202ENST00000569111 1201 ntBASIC3.84□□□□□ -1.79
VCLP18206 AC005412.1-201ENST00000580812 1049 ntBASIC3.84□□□□□ -1.79
VCLP18206 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.84□□□□□ -1.79
VCLP18206 AC010928.3-201ENST00000587712 541 ntBASIC3.84□□□□□ -1.79
VCLP18206 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.84□□□□□ -1.79
VCLP18206 AL354798.1-201ENST00000622505 329 ntBASIC3.84□□□□□ -1.79
VCLP18206 AL049777.1-201ENST00000622740 518 ntBASIC3.84□□□□□ -1.79
VCLP18206 AP003485.1-201ENST00000625093 753 ntBASIC3.84□□□□□ -1.79
VCLP18206 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.84□□□□□ -1.79
VCLP18206 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.84□□□□□ -1.79
VCLP18206 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VCLP18206 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.84□□□□□ -1.79
VCLP18206 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VCLP18206 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VCLP18206 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VCLP18206 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.83□□□□□ -1.8
VCLP18206 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.83□□□□□ -1.8
VCLP18206 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VCLP18206 RNU6-1066P-201ENST00000363573 105 ntBASIC3.83□□□□□ -1.8
VCLP18206 RNU6-298P-201ENST00000390888 96 ntBASIC3.83□□□□□ -1.8
VCLP18206 AL133384.1-201ENST00000412744 351 ntBASIC3.83□□□□□ -1.8
VCLP18206 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.83□□□□□ -1.8
VCLP18206 FCF1P2-201ENST00000415284 583 ntBASIC3.83□□□□□ -1.8
VCLP18206 AC244098.2-201ENST00000422068 99 ntBASIC3.83□□□□□ -1.8
VCLP18206 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.83□□□□□ -1.8
VCLP18206 AC005345.1-201ENST00000431868 217 ntBASIC3.83□□□□□ -1.8
VCLP18206 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.83□□□□□ -1.8
VCLP18206 RPL23AP16-201ENST00000441715 421 ntBASIC3.83□□□□□ -1.8
VCLP18206 MTCYBP42-201ENST00000444653 1130 ntBASIC3.83□□□□□ -1.8
VCLP18206 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.83□□□□□ -1.8
VCLP18206 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.83□□□□□ -1.8
VCLP18206 TRBV26-201ENST00000456572 344 ntBASIC3.83□□□□□ -1.8
VCLP18206 CEACAMP4-201ENST00000457676 421 ntBASIC3.83□□□□□ -1.8
VCLP18206 RPL6P9-201ENST00000466502 859 ntBASIC3.83□□□□□ -1.8
VCLP18206 SYPL1P1-201ENST00000473622 768 ntBASIC3.83□□□□□ -1.8
VCLP18206 RN7SL323P-201ENST00000494712 295 ntBASIC3.83□□□□□ -1.8
VCLP18206 TRAV31-201ENST00000502780 342 ntBASIC3.83□□□□□ -1.8
VCLP18206 BOLA3P3-201ENST00000505182 232 ntBASIC3.83□□□□□ -1.8
VCLP18206 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.83□□□□□ -1.8
VCLP18206 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.83□□□□□ -1.8
VCLP18206 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.83□□□□□ -1.8
VCLP18206 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.83□□□□□ -1.8
VCLP18206 NDUFA5P2-201ENST00000519723 344 ntBASIC3.83□□□□□ -1.8
VCLP18206 AC087369.1-201ENST00000520775 996 ntBASIC3.83□□□□□ -1.8
VCLP18206 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.83□□□□□ -1.8
VCLP18206 MTND5P21-201ENST00000531961 522 ntBASIC3.83□□□□□ -1.8
VCLP18206 AP004242.1-201ENST00000533701 349 ntBASIC3.83□□□□□ -1.8
VCLP18206 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.83□□□□□ -1.8
VCLP18206 AC106785.1-201ENST00000565935 262 ntBASIC3.83□□□□□ -1.8
VCLP18206 RN7SL703P-201ENST00000578485 302 ntBASIC3.83□□□□□ -1.8
VCLP18206 AL355812.1-201ENST00000603215 216 ntBASIC3.83□□□□□ -1.8
VCLP18206 AC025588.3-201ENST00000604182 274 ntBASIC3.83□□□□□ -1.8
VCLP18206 AC012531.5-201ENST00000611375 151 ntBASIC3.83□□□□□ -1.8
VCLP18206 AL592148.2-201ENST00000612210 372 ntBASIC3.83□□□□□ -1.8
VCLP18206 AC005344.1-201ENST00000613391 459 ntBASIC3.83□□□□□ -1.8
VCLP18206 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.83□□□□□ -1.8
VCLP18206 AC013437.2-201ENST00000639587 677 ntBASIC3.83□□□□□ -1.8
VCLP18206 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms