Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC105918.1-201ENST00000474399 838 ntBASIC4.65□□□□□ -1.67
TOP2AP11388 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.65□□□□□ -1.67
TOP2AP11388 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TOP2AP11388 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TOP2AP11388 OR52B1P-201ENST00000316506 909 ntBASIC4.64□□□□□ -1.67
TOP2AP11388 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.64□□□□□ -1.67
TOP2AP11388 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.64□□□□□ -1.67
TOP2AP11388 FGF7P3-201ENST00000454645 303 ntBASIC4.64□□□□□ -1.67
TOP2AP11388 AL008729.2-201ENST00000606393 473 ntBASIC4.64□□□□□ -1.67
TOP2AP11388 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TOP2AP11388 AC016717.2-201ENST00000609089 5141 ntBASIC4.63□□□□□ -1.67
TOP2AP11388 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TOP2AP11388 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TOP2AP11388 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TOP2AP11388 AL138878.1-201ENST00000405131 347 ntBASIC4.63□□□□□ -1.67
TOP2AP11388 FDX1P2-201ENST00000450769 375 ntBASIC4.63□□□□□ -1.67
TOP2AP11388 RPS20P32-201ENST00000456044 356 ntBASIC4.63□□□□□ -1.67
TOP2AP11388 AP004217.1-201ENST00000480579 346 ntBASIC4.63□□□□□ -1.67
TOP2AP11388 RPL7P20-201ENST00000520308 745 ntBASIC4.63□□□□□ -1.67
TOP2AP11388 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.63□□□□□ -1.67
TOP2AP11388 SNORD53-201ENST00000579969 78 ntBASIC4.63□□□□□ -1.67
TOP2AP11388 AC008277.2-201ENST00000605196 797 ntBASIC4.63□□□□□ -1.67
TOP2AP11388 MTND4P10-201ENST00000446199 1363 ntBASIC4.63□□□□□ -1.67
TOP2AP11388 AC004972.1-201ENST00000623934 2209 ntBASIC4.63□□□□□ -1.67
TOP2AP11388 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.63□□□□□ -1.67
TOP2AP11388 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TOP2AP11388 AC109315.1-201ENST00000584143 1347 ntBASIC4.63□□□□□ -1.67
TOP2AP11388 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TOP2AP11388 AC092881.1-201ENST00000638218 2733 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TOP2AP11388 AC233981.1-201ENST00000423224 461 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 RPL23AP15-201ENST00000450202 459 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 AC078785.3-201ENST00000476607 425 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 AC090281.1-201ENST00000523019 276 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 IGKV3-31-201ENST00000523109 329 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
TOP2AP11388 AC079228.1-201ENST00000624774 1049 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.62□□□□□ -1.67
TOP2AP11388 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TOP2AP11388 AP000526.1-201ENST00000603308 1388 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TOP2AP11388 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TOP2AP11388 OR11H5P-202ENST00000641612 1325 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TOP2AP11388 MIR181A2-201ENST00000384863 110 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 RPL21P3-201ENST00000395517 478 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.62□□□□□ -1.67
TOP2AP11388 AC146507.2-201ENST00000460608 476 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.62□□□□□ -1.67
TOP2AP11388 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.62□□□□□ -1.67
TOP2AP11388 AC005046.1-201ENST00000608515 625 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 AC025034.2-201ENST00000623264 286 ntBASIC4.62□□□□□ -1.67
TOP2AP11388 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TOP2AP11388 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TOP2AP11388 RNU6-249P-201ENST00000363016 102 ntBASIC4.61□□□□□ -1.67
TOP2AP11388 FCF1P1-201ENST00000432690 571 ntBASIC4.61□□□□□ -1.67
TOP2AP11388 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.61□□□□□ -1.67
TOP2AP11388 AC125238.1-201ENST00000448842 249 ntBASIC4.61□□□□□ -1.67
TOP2AP11388 AC122134.1-201ENST00000565664 1104 ntBASIC4.61□□□□□ -1.67
TOP2AP11388 MIR3605-201ENST00000583214 100 ntBASIC4.61□□□□□ -1.67
TOP2AP11388 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TOP2AP11388 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TOP2AP11388 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TOP2AP11388 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TOP2AP11388 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TOP2AP11388 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TOP2AP11388 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.6□□□□□ -1.67
TOP2AP11388 B3GNT2P1-201ENST00000434960 952 ntBASIC4.6□□□□□ -1.67
TOP2AP11388 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TOP2AP11388 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TOP2AP11388 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.6□□□□□ -1.67
TOP2AP11388 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.6□□□□□ -1.67
TOP2AP11388 RNU6-1231P-201ENST00000517185 103 ntBASIC4.6□□□□□ -1.67
TOP2AP11388 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.6□□□□□ -1.67
TOP2AP11388 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TOP2AP11388 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.6□□□□□ -1.67
TOP2AP11388 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.6□□□□□ -1.67
TOP2AP11388 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TOP2AP11388 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TOP2AP11388 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TOP2AP11388 SNORA36C-201ENST00000384289 132 ntBASIC4.59□□□□□ -1.67
TOP2AP11388 MIR592-201ENST00000384959 97 ntBASIC4.59□□□□□ -1.67
TOP2AP11388 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.59□□□□□ -1.67
TOP2AP11388 PPIAP17-201ENST00000438507 471 ntBASIC4.59□□□□□ -1.67
TOP2AP11388 CBX1P4-201ENST00000439415 457 ntBASIC4.59□□□□□ -1.67
TOP2AP11388 UBL5P3-201ENST00000475112 231 ntBASIC4.59□□□□□ -1.67
TOP2AP11388 RN7SKP283-201ENST00000517197 270 ntBASIC4.59□□□□□ -1.67
TOP2AP11388 AC103810.6-201ENST00000606708 136 ntBASIC4.59□□□□□ -1.67
TOP2AP11388 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.59□□□□□ -1.67
TOP2AP11388 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
TOP2AP11388 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.59□□□□□ -1.68
TOP2AP11388 SNORA70E-201ENST00000384492 135 ntBASIC4.58□□□□□ -1.68
TOP2AP11388 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.58□□□□□ -1.68
TOP2AP11388 AC021205.1-201ENST00000468797 348 ntBASIC4.58□□□□□ -1.68
TOP2AP11388 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.58□□□□□ -1.68
TOP2AP11388 SNORA9.3-201ENST00000516383 129 ntBASIC4.58□□□□□ -1.68
TOP2AP11388 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.58□□□□□ -1.68
TOP2AP11388 AC011492.1-201ENST00000600023 315 ntBASIC4.58□□□□□ -1.68
TOP2AP11388 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TOP2AP11388 AC004987.3-201ENST00000413879 771 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms