Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC007954.1-201ENST00000554198 494 ntBASIC3.42□□□□□ -1.86
COL1A1P02452 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.42□□□□□ -1.86
COL1A1P02452 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL1A1P02452 XGY1-201ENST00000381172 446 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COL1A1P02452 RPL21P3-201ENST00000395517 478 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 RNA5SP274-201ENST00000410484 108 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 RNU2-52P-201ENST00000410680 190 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 RNA5SP21-201ENST00000410917 96 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.41□□□□□ -1.86
COL1A1P02452 MRPL50P2-201ENST00000416821 482 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 AC146507.2-201ENST00000460608 476 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 AC003982.1-202ENST00000469928 248 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 UBL5P3-201ENST00000475112 231 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 AC118282.1-201ENST00000506408 765 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 AC119751.1-201ENST00000513357 765 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL1A1P02452 AC009097.3-201ENST00000563557 1018 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 MIR7843-201ENST00000622274 79 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
COL1A1P02452 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
COL1A1P02452 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.41□□□□□ -1.86
COL1A1P02452 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL1A1P02452 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL1A1P02452 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL1A1P02452 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL1A1P02452 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.41□□□□□ -1.86
COL1A1P02452 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL1A1P02452 CR382285.2-201ENST00000624662 1495 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL1A1P02452 RNU6-304P-201ENST00000364855 107 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.41□□□□□ -1.86
COL1A1P02452 RNU6-178P-201ENST00000384631 104 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.41□□□□□ -1.86
COL1A1P02452 ARL5AP4-201ENST00000430731 512 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 AL357520.1-201ENST00000441557 453 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 AL513124.1-201ENST00000450410 614 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 EEF1B2P7-201ENST00000451177 676 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 RPS3P1-201ENST00000456781 192 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 MIR4524B-201ENST00000581569 115 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 AC026790.2-201ENST00000606282 430 ntBASIC3.41□□□□□ -1.86
COL1A1P02452 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.41□□□□□ -1.86
COL1A1P02452 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.41□□□□□ -1.86
COL1A1P02452 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.4□□□□□ -1.87
COL1A1P02452 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
COL1A1P02452 MIR148B-201ENST00000362252 99 ntBASIC3.4□□□□□ -1.87
COL1A1P02452 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL1A1P02452 AL138827.1-201ENST00000402666 306 ntBASIC3.4□□□□□ -1.87
COL1A1P02452 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.4□□□□□ -1.87
COL1A1P02452 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.4□□□□□ -1.87
COL1A1P02452 AC003685.2-201ENST00000422795 395 ntBASIC3.4□□□□□ -1.87
COL1A1P02452 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.4□□□□□ -1.87
COL1A1P02452 AC010095.1-201ENST00000443543 144 ntBASIC3.4□□□□□ -1.87
COL1A1P02452 MTND4LP12-201ENST00000448237 295 ntBASIC3.4□□□□□ -1.87
COL1A1P02452 AC090525.1-201ENST00000479116 478 ntBASIC3.4□□□□□ -1.87
COL1A1P02452 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL1A1P02452 RNU1-41P-201ENST00000516161 162 ntBASIC3.4□□□□□ -1.87
COL1A1P02452 RNU1-48P-201ENST00000516400 162 ntBASIC3.4□□□□□ -1.87
COL1A1P02452 AC007424.1-203ENST00000554613 687 ntBASIC3.4□□□□□ -1.87
COL1A1P02452 AC009101.1-201ENST00000568135 242 ntBASIC3.4□□□□□ -1.87
COL1A1P02452 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
COL1A1P02452 AL355493.4-201ENST00000618530 292 ntBASIC3.4□□□□□ -1.87
COL1A1P02452 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.4□□□□□ -1.87
COL1A1P02452 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.4□□□□□ -1.87
COL1A1P02452 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL1A1P02452 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
COL1A1P02452 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL1A1P02452 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL1A1P02452 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
COL1A1P02452 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.39□□□□□ -1.87
COL1A1P02452 NPM1P11-201ENST00000417106 855 ntBASIC3.39□□□□□ -1.87
COL1A1P02452 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.39□□□□□ -1.87
COL1A1P02452 SRIP2-201ENST00000428470 166 ntBASIC3.39□□□□□ -1.87
COL1A1P02452 NECAP1P2-201ENST00000455668 727 ntBASIC3.39□□□□□ -1.87
COL1A1P02452 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.39□□□□□ -1.87
COL1A1P02452 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.39□□□□□ -1.87
COL1A1P02452 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.39□□□□□ -1.87
COL1A1P02452 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.39□□□□□ -1.87
COL1A1P02452 AC021146.5-201ENST00000503544 545 ntBASIC3.39□□□□□ -1.87
COL1A1P02452 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
COL1A1P02452 Y_RNA.676-201ENST00000516393 96 ntBASIC3.39□□□□□ -1.87
COL1A1P02452 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL1A1P02452 PDCD5P1-201ENST00000543528 309 ntBASIC3.39□□□□□ -1.87
COL1A1P02452 CD24P2-201ENST00000565486 219 ntBASIC3.39□□□□□ -1.87
COL1A1P02452 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.39□□□□□ -1.87
COL1A1P02452 VN1R78P-201ENST00000597393 564 ntBASIC3.39□□□□□ -1.87
COL1A1P02452 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.39□□□□□ -1.87
COL1A1P02452 AC092628.2-201ENST00000622492 339 ntBASIC3.39□□□□□ -1.87
COL1A1P02452 AC009039.2-201ENST00000624524 529 ntBASIC3.39□□□□□ -1.87
COL1A1P02452 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.39□□□□□ -1.87
COL1A1P02452 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
COL1A1P02452 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL1A1P02452 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL1A1P02452 AC007336.1-201ENST00000576365 3828 ntBASIC3.38□□□□□ -1.87
COL1A1P02452 RAD1P1-201ENST00000231383 813 ntBASIC3.38□□□□□ -1.87
COL1A1P02452 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
COL1A1P02452 OR13C3-201ENST00000374781 1108 ntBASIC3.38□□□□□ -1.87
COL1A1P02452 SNORA70E-201ENST00000384492 135 ntBASIC3.38□□□□□ -1.87
COL1A1P02452 RPL31P1-201ENST00000398116 372 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms