Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFBP01127 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.85□□□□□ -1.79
PDGFBP01127 RPS17P11-201ENST00000474297 293 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 AP001086.1-201ENST00000494882 321 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 PRELID3BP6-201ENST00000503839 571 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
PDGFBP01127 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFBP01127 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFBP01127 OR4A12P-201ENST00000530847 918 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFBP01127 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.85□□□□□ -1.79
PDGFBP01127 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFBP01127 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.85□□□□□ -1.79
PDGFBP01127 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFBP01127 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFBP01127 AC074051.3-201ENST00000570238 358 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 AC008507.2-201ENST00000588402 1176 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 AC006116.7-201ENST00000590141 756 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFBP01127 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFBP01127 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.85□□□□□ -1.79
PDGFBP01127 AC011492.1-201ENST00000600023 315 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 AL121652.1-201ENST00000608851 448 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 AL139089.1-201ENST00000620372 975 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 AC093875.1-201ENST00000623688 504 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 AP005264.7-201ENST00000625003 745 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PDGFBP01127 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
PDGFBP01127 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.85□□□□□ -1.79
PDGFBP01127 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFBP01127 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
PDGFBP01127 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PDGFBP01127 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
PDGFBP01127 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.84□□□□□ -1.79
PDGFBP01127 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PDGFBP01127 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.84□□□□□ -1.79
PDGFBP01127 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PDGFBP01127 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.84□□□□□ -1.79
PDGFBP01127 SNORD9-201ENST00000362566 104 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 RNU6-468P-201ENST00000384003 109 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 RNU6-207P-201ENST00000384137 107 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 RNU6-925P-201ENST00000384629 104 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 MIR607-201ENST00000385241 96 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 RNU6-932P-201ENST00000391108 106 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.84□□□□□ -1.79
PDGFBP01127 AC096533.1-201ENST00000411645 353 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 RPL7AP73-201ENST00000413490 353 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AC244098.2-201ENST00000422068 99 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 USP9YP36-201ENST00000424581 829 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFBP01127 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.84□□□□□ -1.79
PDGFBP01127 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 USP9YP31-201ENST00000431405 881 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFBP01127 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFBP01127 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.84□□□□□ -1.79
PDGFBP01127 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.84□□□□□ -1.79
PDGFBP01127 CDC42P1-201ENST00000456658 548 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 RPS27AP1-201ENST00000475545 471 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AC092451.1-201ENST00000480211 153 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AC108022.1-201ENST00000493466 478 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 RNU6-416P-201ENST00000516265 103 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.84□□□□□ -1.79
PDGFBP01127 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFBP01127 OR4C2P-201ENST00000530855 1064 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.84□□□□□ -1.79
PDGFBP01127 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFBP01127 CYP2C60P-201ENST00000566088 139 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AC010653.1-201ENST00000571108 881 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AC068790.5-201ENST00000602741 355 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AC144521.1-201ENST00000607148 956 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AF129408.1-201ENST00000608767 431 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AC008759.3-201ENST00000613300 508 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AC022306.3-201ENST00000619930 550 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.84□□□□□ -1.79
PDGFBP01127 AC005086.4-201ENST00000623065 213 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AL590396.4-201ENST00000636779 956 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 AL365440.1-201ENST00000436135 2167 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 SGO1P1-201ENST00000603525 1447 ntBASIC3.84□□□□□ -1.79
PDGFBP01127 ZNF734P-201ENST00000419494 1534 ntBASIC3.84□□□□□ -1.8
PDGFBP01127 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
PDGFBP01127 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.84□□□□□ -1.8
PDGFBP01127 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.84□□□□□ -1.8
PDGFBP01127 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
PDGFBP01127 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.83□□□□□ -1.8
PDGFBP01127 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFBP01127 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.83□□□□□ -1.8
PDGFBP01127 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.83□□□□□ -1.8
PDGFBP01127 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFBP01127 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFBP01127 MIR448-201ENST00000362131 111 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 RNU1-108P-201ENST00000362556 161 ntBASIC3.83□□□□□ -1.8
PDGFBP01127 MIR16-1-201ENST00000385271 89 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms