Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 TXNL1P1-201ENST00000429528 554 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.82□□□□□ -1.8
CLPTM1O96005 AC016712.1-201ENST00000431088 378 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.82□□□□□ -1.8
CLPTM1O96005 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.82□□□□□ -1.8
CLPTM1O96005 UBE2D3P1-201ENST00000436669 444 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 USP9YP22-201ENST00000438971 294 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AC004865.1-201ENST00000442276 1003 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 RAB11AP1-201ENST00000442978 646 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 DNAJC19P1-201ENST00000455312 319 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 RPL37P3-201ENST00000456825 293 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AC007537.2-201ENST00000472093 511 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 BET1P1-201ENST00000482276 359 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.82□□□□□ -1.8
CLPTM1O96005 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.82□□□□□ -1.8
CLPTM1O96005 AC117522.2-201ENST00000510049 657 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.82□□□□□ -1.8
CLPTM1O96005 RNU2-58P-201ENST00000516403 183 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.82□□□□□ -1.8
CLPTM1O96005 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.82□□□□□ -1.8
CLPTM1O96005 AF279873.1-201ENST00000523393 313 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLPTM1O96005 AC009643.1-201ENST00000532030 391 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AP000619.3-201ENST00000535634 1127 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.82□□□□□ -1.8
CLPTM1O96005 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CLPTM1O96005 AC008015.1-201ENST00000555505 465 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.82□□□□□ -1.8
CLPTM1O96005 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.82□□□□□ -1.8
CLPTM1O96005 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.82□□□□□ -1.8
CLPTM1O96005 LLPHP1-201ENST00000603571 367 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AL031281.1-201ENST00000604049 488 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AC091488.1-201ENST00000604239 660 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 Z94722.1-201ENST00000604328 474 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AL356218.2-201ENST00000605264 187 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AC018638.7-201ENST00000605836 1114 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AL451074.6-201ENST00000608512 729 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.82□□□□□ -1.8
CLPTM1O96005 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CLPTM1O96005 MFSD8-242ENST00000641690 4199 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLPTM1O96005 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLPTM1O96005 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.81□□□□□ -1.8
CLPTM1O96005 EIF2AP4-201ENST00000424793 1781 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLPTM1O96005 AP000776.1-201ENST00000530032 1663 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CLPTM1O96005 GABPAP-201ENST00000419271 1356 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC008033.1-201ENST00000216407 1162 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CLPTM1O96005 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLPTM1O96005 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CLPTM1O96005 AC097374.1-203ENST00000400783 485 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.81□□□□□ -1.8
CLPTM1O96005 PGBD4P8-201ENST00000412993 562 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.81□□□□□ -1.8
CLPTM1O96005 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.81□□□□□ -1.8
CLPTM1O96005 AL139421.1-201ENST00000423010 169 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.81□□□□□ -1.8
CLPTM1O96005 Z93242.1-201ENST00000427102 353 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLPTM1O96005 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.81□□□□□ -1.8
CLPTM1O96005 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.81□□□□□ -1.8
CLPTM1O96005 USP9YP31-201ENST00000431405 881 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.81□□□□□ -1.8
CLPTM1O96005 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.81□□□□□ -1.8
CLPTM1O96005 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.81□□□□□ -1.8
CLPTM1O96005 RFC5P1-201ENST00000454419 874 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 RPL23AP24-201ENST00000458203 385 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 RNU7-170P-201ENST00000459303 61 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.81□□□□□ -1.8
CLPTM1O96005 AC078817.1-201ENST00000492623 435 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.81□□□□□ -1.8
CLPTM1O96005 AC104090.1-201ENST00000506341 1171 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC025674.1-201ENST00000507074 324 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC008885.2-201ENST00000509506 930 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC023141.12-201ENST00000512399 199 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.81□□□□□ -1.8
CLPTM1O96005 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.81□□□□□ -1.8
CLPTM1O96005 IGKV2-23-201ENST00000518729 323 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC087808.1-201ENST00000520501 361 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLPTM1O96005 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.81□□□□□ -1.8
CLPTM1O96005 OR5BC1P-201ENST00000529327 739 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.81□□□□□ -1.8
CLPTM1O96005 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.81□□□□□ -1.8
CLPTM1O96005 AC005191.1-201ENST00000603950 358 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC090948.1-201ENST00000607464 549 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AL139418.1-201ENST00000613613 177 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AL021997.2-201ENST00000615674 271 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC121761.2-201ENST00000617300 689 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLPTM1O96005 AC069209.1-201ENST00000619282 651 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CLPTM1O96005 CR392039.4-201ENST00000624968 501 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC116618.1-201ENST00000634617 774 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms