Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.03□□□□□ -1.92
UPK1AO00322 RPL21P12-201ENST00000559810 515 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 MIR4444-1-201ENST00000581696 74 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 MIR4444-2-201ENST00000584390 74 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 AC073657.2-201ENST00000605661 303 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 AC113194.1-201ENST00000606037 500 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 AC016911.1-201ENST00000613297 452 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 AC009464.1-201ENST00000615731 469 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.03□□□□□ -1.92
UPK1AO00322 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.03□□□□□ -1.92
UPK1AO00322 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.03□□□□□ -1.92
UPK1AO00322 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
UPK1AO00322 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
UPK1AO00322 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
UPK1AO00322 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
UPK1AO00322 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.02□□□□□ -1.93
UPK1AO00322 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
UPK1AO00322 OR52E6-202ENST00000379946 954 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 RNU6-356P-201ENST00000384140 107 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 RNU6-40P-201ENST00000384254 107 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 AC063979.1-201ENST00000415539 377 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 AL590623.1-201ENST00000427864 105 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.02□□□□□ -1.93
UPK1AO00322 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.02□□□□□ -1.93
UPK1AO00322 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.02□□□□□ -1.93
UPK1AO00322 RPS12P18-201ENST00000442381 270 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 HMGB3P6-201ENST00000444896 598 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.02□□□□□ -1.93
UPK1AO00322 UQCRHP3-201ENST00000451503 251 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.02□□□□□ -1.93
UPK1AO00322 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.02□□□□□ -1.93
UPK1AO00322 HMGB3P30-201ENST00000457863 606 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.02□□□□□ -1.93
UPK1AO00322 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.02□□□□□ -1.93
UPK1AO00322 SNX5P1-201ENST00000505757 1041 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.02□□□□□ -1.93
UPK1AO00322 AC008562.1-201ENST00000521763 330 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.02□□□□□ -1.93
UPK1AO00322 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.02□□□□□ -1.93
UPK1AO00322 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
UPK1AO00322 CENPUP2-201ENST00000555897 1186 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.02□□□□□ -1.93
UPK1AO00322 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.02□□□□□ -1.93
UPK1AO00322 AC018618.2-201ENST00000604770 446 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 AC015849.2-201ENST00000605738 409 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.02□□□□□ -1.93
UPK1AO00322 AC121761.2-201ENST00000617300 689 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 AC091903.1-201ENST00000624322 454 ntBASIC3.02□□□□□ -1.93
UPK1AO00322 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.02□□□□□ -1.93
UPK1AO00322 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
UPK1AO00322 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
UPK1AO00322 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
UPK1AO00322 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
UPK1AO00322 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
UPK1AO00322 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
UPK1AO00322 METTL21EP-201ENST00000298105 713 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 SNORA71.3-201ENST00000362582 128 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 AC083799.1-201ENST00000366451 910 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 DNAJC19P6-201ENST00000401853 280 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.01□□□□□ -1.93
UPK1AO00322 LINC01347-201ENST00000417964 355 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 RPF2P1-201ENST00000424137 906 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.01□□□□□ -1.93
UPK1AO00322 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.01□□□□□ -1.93
UPK1AO00322 PRDX3P3-201ENST00000447765 522 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 AP000873.1-201ENST00000463987 400 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 RPS4XP10-201ENST00000465034 731 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.01□□□□□ -1.93
UPK1AO00322 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.01□□□□□ -1.93
UPK1AO00322 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.01□□□□□ -1.93
UPK1AO00322 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.01□□□□□ -1.93
UPK1AO00322 PTGES3P3-201ENST00000511479 482 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.01□□□□□ -1.93
UPK1AO00322 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.01□□□□□ -1.93
UPK1AO00322 HMGB1P23-201ENST00000518743 568 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.01□□□□□ -1.93
UPK1AO00322 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.01□□□□□ -1.93
UPK1AO00322 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.01□□□□□ -1.93
UPK1AO00322 MIR2682-201ENST00000580305 110 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 ZNF415P1-201ENST00000582279 1166 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.01□□□□□ -1.93
UPK1AO00322 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.01□□□□□ -1.93
UPK1AO00322 CKS1BP3-201ENST00000600888 237 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 AL591516.1-201ENST00000611326 274 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 MIR6864-201ENST00000617935 70 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 MIR7975-201ENST00000619350 68 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 AC006065.5-201ENST00000623427 349 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
UPK1AO00322 AC007256.1-201ENST00000392253 2765 ntBASIC3.01□□□□□ -1.93
UPK1AO00322 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
UPK1AO00322 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
UPK1AO00322 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
UPK1AO00322 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3□□□□□ -1.93
UPK1AO00322 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
UPK1AO00322 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3□□□□□ -1.93
UPK1AO00322 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3□□□□□ -1.93
UPK1AO00322 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
UPK1AO00322 VTA1P1-201ENST00000414044 866 ntBASIC3□□□□□ -1.93
UPK1AO00322 AC245054.2-201ENST00000415639 319 ntBASIC3□□□□□ -1.93
UPK1AO00322 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms