Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 CYCSP4-201ENST00000429682 331 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AL159987.2-201ENST00000432754 307 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC023347.2-201ENST00000433994 462 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AL356535.1-201ENST00000440335 398 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 HMGB1P48-201ENST00000446155 598 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 PLGLA-201ENST00000465668 449 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 RPL6P9-201ENST00000466502 859 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC104164.3-201ENST00000467363 1258 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC096571.1-202ENST00000506634 735 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 MTATP6P22-201ENST00000507369 598 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC008837.1-201ENST00000511513 412 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 FTH1P9-201ENST00000513251 355 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 RNU6-276P-201ENST00000516114 96 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AF279873.1-201ENST00000523393 313 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC006116.10-201ENST00000591836 581 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC008687.2-201ENST00000597865 520 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC096947.1-201ENST00000603233 470 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC010680.3-201ENST00000604215 520 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC091488.1-201ENST00000604239 660 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 ELOCP35-201ENST00000604289 336 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC007179.3-201ENST00000604976 235 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 BRDTP1-201ENST00000605735 677 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AL109659.3-201ENST00000624985 950 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC138393.1-206ENST00000540997 1886 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 HSPA8P1-201ENST00000425843 1833 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AL365440.1-201ENST00000436135 2167 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AL136964.1-201ENST00000622038 2990 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.71□□□□□ -1.81
NEDD8-MDP1E9PL57 SGO1P1-201ENST00000603525 1447 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 BDP1P-201ENST00000582658 1990 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 RNU6-1151P-201ENST00000384684 107 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 RNU6-272P-201ENST00000411028 104 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 LIPT1P1-201ENST00000415870 1186 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC092641.1-201ENST00000440229 772 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 TVP23BP2-201ENST00000455082 615 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC099563.1-201ENST00000456086 418 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC069499.1-201ENST00000489433 509 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC074250.1-201ENST00000511117 192 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 HIGD1AP6-201ENST00000521833 279 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC103843.2-201ENST00000530523 682 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC023161.2-201ENST00000551218 780 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 MIR4666A-201ENST00000580160 79 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 BNIP3P40-201ENST00000596017 556 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC002487.1-201ENST00000604565 994 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC073387.2-201ENST00000604797 784 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 CYCSP41-201ENST00000616920 296 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC069209.1-201ENST00000619282 651 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 OR4G3P-201ENST00000633500 913 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 AC066616.2-201ENST00000559334 1481 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 EXOC5P1-201ENST00000510543 1969 ntBASIC3.71□□□□□ -1.82
NEDD8-MDP1E9PL57 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC016716.1-201ENST00000265882 708 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 RNA5SP50-201ENST00000363731 107 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 MIR490-201ENST00000384865 128 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 MTCO1P56-201ENST00000401674 224 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms