Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MIR142-201ENST00000384835 87 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC092832.1-201ENST00000422934 400 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 ARF4P2-201ENST00000430209 526 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 TVP23BP2-201ENST00000455082 615 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 SNORD108-201ENST00000459332 71 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AP000873.1-201ENST00000463987 400 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AL049830.2-201ENST00000480072 201 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC012170.1-201ENST00000495139 359 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 SNX5P1-201ENST00000505757 1041 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 SUMO2P5-201ENST00000506790 245 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 FCF1P8-201ENST00000510322 597 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC104619.4-201ENST00000510773 249 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 PHBP14-201ENST00000512887 367 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 Vault.1-201ENST00000516474 102 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 RNU1-45P-201ENST00000517191 141 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC023632.4-201ENST00000517783 191 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 IGKV2-26-201ENST00000518305 343 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC245166.1-201ENST00000521012 253 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC093331.1-201ENST00000521474 169 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC027449.1-201ENST00000608890 407 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC112503.2-201ENST00000609005 552 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC243654.2-201ENST00000612843 443 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AP000943.4-201ENST00000622912 357 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 AC107081.3-201ENST00000612715 2034 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AL356274.2-201ENST00000624379 3752 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AL122126.1-201ENST00000546905 1318 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 RNU6-543P-201ENST00000362576 108 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 RNU4-35P-201ENST00000362588 141 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 RNU6-98P-201ENST00000384173 107 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 MIR124-3-201ENST00000384866 87 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 MIR554-201ENST00000384874 96 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 RNU6-1000P-201ENST00000391066 106 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC007899.1-201ENST00000412776 775 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC013404.1-201ENST00000413068 249 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AL049610.1-201ENST00000423374 372 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 MTCO2P23-201ENST00000425216 680 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 FO393419.3-201ENST00000428741 282 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 ARL5AP2-201ENST00000444698 533 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 SNORA84-201ENST00000459229 133 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 PRELID3BP6-201ENST00000503839 571 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AP001372.4-201ENST00000524889 472 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 OR5AK3P-201ENST00000527486 1297 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC008083.2-201ENST00000546707 476 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 MIR4789-201ENST00000577469 82 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC022884.3-201ENST00000579571 248 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC011374.2-201ENST00000607135 526 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC021851.1-201ENST00000608537 1082 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC034229.5-201ENST00000624258 185 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AC091903.1-201ENST00000624322 454 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 AP003485.1-201ENST00000625093 753 ntBASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM49D1C9J1S8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TRIM49D1C9J1S8 U3.6-201ENST00000363622 211 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms