Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PGBD4P4-201ENST00000509673 613 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AC005798.1-201ENST00000513715 387 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AP002748.2-201ENST00000528671 348 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 BNIP3P1-201ENST00000547295 580 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 GSTP1P1-201ENST00000548078 319 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AC245505.1-201ENST00000556398 224 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AC022884.2-201ENST00000578535 580 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AC131902.3-201ENST00000611767 581 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AL589743.7-201ENST00000612637 233 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AC099842.1-201ENST00000619919 596 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 MTCO1P24-201ENST00000515438 1558 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AC026951.1-201ENST00000559530 2459 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AC017104.4-201ENST00000636283 1592 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 FRG1BP-201ENST00000278882 761 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 RNA5SP258-201ENST00000362750 119 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AC019155.1-201ENST00000382242 574 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 RNU5A-6P-201ENST00000384136 116 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 RNU6-809P-201ENST00000384461 107 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 MIR141-201ENST00000384975 95 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AL356421.1-201ENST00000403255 413 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 Y_RNA.608-201ENST00000410647 95 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AC007742.1-201ENST00000425789 329 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 C8orf59P1-201ENST00000429930 303 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 ELOCP26-201ENST00000436067 329 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 RPL34P20-201ENST00000442771 351 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 MRPL48P1-201ENST00000445390 636 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 RPL29P29-201ENST00000448725 423 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AC009220.1-201ENST00000451614 275 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AL513533.1-201ENST00000453728 415 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AC099563.1-201ENST00000456086 418 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AP1S2P1-201ENST00000457344 379 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 RN7SL738P-201ENST00000470264 297 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 NIP7P2-201ENST00000485801 544 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 BNIP3P41-201ENST00000503774 571 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 BTF3P13-201ENST00000513224 490 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 MIR4528-201ENST00000577763 90 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 MIR4458-201ENST00000578872 75 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 RN7SL435P-201ENST00000584418 282 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AC073648.5-201ENST00000603502 305 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AP003117.2-201ENST00000606010 545 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AL161616.1-201ENST00000611867 286 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AC005332.10-201ENST00000612725 619 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 MIR6839-201ENST00000620425 113 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 OR51H2P-202ENST00000641424 3046 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA3Q9Y5H0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 AP001273.1-201ENST00000624493 3152 ntBASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 RNU6-359P-201ENST00000365466 108 ntBASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 RNU6-348P-201ENST00000384386 107 ntBASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 SNORA66-201ENST00000384792 133 ntBASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 RN7SKP33-201ENST00000410942 340 ntBASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 AF274854.1-201ENST00000413236 615 ntBASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 ELOCP17-201ENST00000414751 326 ntBASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 OR5BE1P-201ENST00000425977 939 ntBASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHGA3Q9Y5H0 BX890604.2-201ENST00000427883 474 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms