Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 VN1R79P-201ENST00000593540 513 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 AL355812.1-201ENST00000603215 216 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 AC011468.4-201ENST00000603942 409 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 AC138649.3-201ENST00000622154 254 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 AC095050.2-201ENST00000510748 1458 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 AC017104.4-201ENST00000636283 1592 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 FRG1BP-201ENST00000278882 761 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 Y_RNA.46-201ENST00000362695 102 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 RNU6-97P-201ENST00000363387 104 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 RN7SKP224-201ENST00000364140 325 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 RN7SKP226-201ENST00000364912 300 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 RPEP2-201ENST00000432149 701 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 MTCYBP45-201ENST00000435243 565 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AL450263.2-201ENST00000439400 589 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 TPT1P13-201ENST00000449760 499 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC093392.2-201ENST00000450682 337 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 RPS3AP17-201ENST00000472594 777 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC007686.1-201ENST00000488511 463 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC020890.1-201ENST00000491837 504 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 MTCO3P44-201ENST00000510977 541 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC110775.1-201ENST00000513721 462 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC022483.1-201ENST00000514020 567 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AP001922.4-201ENST00000526967 290 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 OR5AN2P-201ENST00000534535 896 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 CENPUP2-201ENST00000555897 1186 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC006960.3-201ENST00000561845 705 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AL161729.4-201ENST00000604650 476 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AL008729.2-201ENST00000606393 473 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC068944.2-201ENST00000610373 403 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 AP000843.1-201ENST00000624880 701 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 SEPT14P19-203ENST00000633205 211 ntBASIC4.84□□□□□ -1.63
CCM2LQ9NUG4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CCM2LQ9NUG4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CCM2LQ9NUG4 AC092125.1-201ENST00000562568 1995 ntBASIC4.84□□□□□ -1.64
CCM2LQ9NUG4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCM2LQ9NUG4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AL359893.1-201ENST00000447628 1580 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AL139811.1-201ENST00000424779 2299 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 RNA5SP305-201ENST00000362665 119 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 RNU6-1207P-201ENST00000384343 107 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 MIR141-201ENST00000384975 95 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 U3.29-201ENST00000391296 212 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AL359704.1-201ENST00000411586 781 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 RPL36AP36-201ENST00000418616 301 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AL353777.1-201ENST00000425552 326 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC108734.1-201ENST00000439549 399 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 RPS11P7-201ENST00000442125 465 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC105399.1-202ENST00000447303 205 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 GAPDHP17-201ENST00000449858 1001 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC009220.1-201ENST00000451614 275 ntBASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.83□□□□□ -1.64
CCM2LQ9NUG4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms