Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RPL12P26-201ENST00000452430 487 ntBASIC0.94□□□□□ -2.26
SYNE1Q8NF91 SNORD109B-201ENST00000458961 67 ntBASIC0.94□□□□□ -2.26
SYNE1Q8NF91 SNORD109A-201ENST00000459128 67 ntBASIC0.94□□□□□ -2.26
SYNE1Q8NF91 VN1R104P-201ENST00000505115 1009 ntBASIC0.94□□□□□ -2.26
SYNE1Q8NF91 MIR2276-201ENST00000516886 89 ntBASIC0.94□□□□□ -2.26
SYNE1Q8NF91 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC0.94□□□□□ -2.26
SYNE1Q8NF91 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC0.94□□□□□ -2.26
SYNE1Q8NF91 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC0.94□□□□□ -2.26
SYNE1Q8NF91 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC0.94□□□□□ -2.26
SYNE1Q8NF91 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
SYNE1Q8NF91 ELL2P4-201ENST00000446870 1376 ntBASIC0.94□□□□□ -2.26
SYNE1Q8NF91 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SYNE1Q8NF91 PTP4A1P1-201ENST00000420539 515 ntBASIC0.94□□□□□ -2.26
SYNE1Q8NF91 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.94□□□□□ -2.26
SYNE1Q8NF91 KRTAP19-11P-201ENST00000439851 104 ntBASIC0.94□□□□□ -2.26
SYNE1Q8NF91 FGF7P3-201ENST00000454645 303 ntBASIC0.94□□□□□ -2.26
SYNE1Q8NF91 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC0.94□□□□□ -2.26
SYNE1Q8NF91 ARL2BPP6-201ENST00000512757 439 ntBASIC0.94□□□□□ -2.26
SYNE1Q8NF91 RFESD-208ENST00000513950 464 ntTSL 5 BASIC0.94□□□□□ -2.26
SYNE1Q8NF91 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
SYNE1Q8NF91 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC0.94□□□□□ -2.26
SYNE1Q8NF91 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SYNE1Q8NF91 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SYNE1Q8NF91 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC0.94□□□□□ -2.26
SYNE1Q8NF91 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AP000936.2-201ENST00000447151 681 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AL139174.1-201ENST00000531489 886 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC011602.1-201ENST00000546484 331 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 MIR5047-201ENST00000579212 100 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 MIR3162-201ENST00000581818 82 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 FER-202ENST00000438717 1531 ntTSL 2 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC110774.1-201ENST00000623567 2018 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC073325.2-201ENST00000339545 159 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AL672167.1-206ENST00000356293 943 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 RNA5SP68-201ENST00000363885 119 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC011816.1-201ENST00000441346 546 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 SNORA70.19-201ENST00000516717 90 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC078814.3-201ENST00000553036 491 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AL713998.2-201ENST00000604538 1198 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 ASNSP1-201ENST00000518311 1939 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AL590103.1-201ENST00000434488 307 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC108734.1-201ENST00000439549 399 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC008565.1-201ENST00000509046 885 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC004832.5-201ENST00000608677 401 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AL450338.1-201ENST00000407987 512 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC012065.2-201ENST00000421295 375 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC022018.1-201ENST00000430685 241 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 RNA5SP445-201ENST00000515889 115 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC025423.2-201ENST00000537570 439 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC005242.1-201ENST00000585658 438 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AL592295.2-201ENST00000612578 206 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC008121.2-201ENST00000614647 523 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC092435.3-201ENST00000565538 3654 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 ANKRD36BP1-201ENST00000358576 1779 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 SNORD6-201ENST00000365444 73 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AL031679.1-201ENST00000400616 525 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 RAB6C-AS1-202ENST00000433431 123 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC025181.1-201ENST00000477507 416 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC090312.2-201ENST00000582687 378 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC096947.1-201ENST00000603233 470 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AL079305.1-201ENST00000623159 3008 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 HSPA8P4-201ENST00000511877 1920 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AL049555.1-201ENST00000562834 1933 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC0.93□□□□□ -2.26
SYNE1Q8NF91 BX276092.3-201ENST00000424182 230 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 RPL21P112-201ENST00000434403 463 ntBASIC0.93□□□□□ -2.26
SYNE1Q8NF91 AC078817.1-201ENST00000492623 435 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms