Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USP41Q3LFD5 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.31□□□□□ -1.72
USP41Q3LFD5 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP41Q3LFD5 AC005832.3-201ENST00000537929 631 ntBASIC4.31□□□□□ -1.72
USP41Q3LFD5 AC012417.1-201ENST00000582307 1039 ntBASIC4.31□□□□□ -1.72
USP41Q3LFD5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.31□□□□□ -1.72
USP41Q3LFD5 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.31□□□□□ -1.72
USP41Q3LFD5 AC114878.2-201ENST00000604863 1251 ntBASIC4.31□□□□□ -1.72
USP41Q3LFD5 HSPE1P14-201ENST00000605812 302 ntBASIC4.31□□□□□ -1.72
USP41Q3LFD5 AL451074.6-201ENST00000608512 729 ntBASIC4.31□□□□□ -1.72
USP41Q3LFD5 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.31□□□□□ -1.72
USP41Q3LFD5 AL359715.5-201ENST00000623431 443 ntBASIC4.31□□□□□ -1.72
USP41Q3LFD5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.31□□□□□ -1.72
USP41Q3LFD5 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP41Q3LFD5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.31□□□□□ -1.72
USP41Q3LFD5 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USP41Q3LFD5 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP41Q3LFD5 SAGE2P-201ENST00000420011 2126 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP41Q3LFD5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 RNU5D-1-201ENST00000363299 116 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 SNORD35B-201ENST00000363660 87 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 MIR200C-201ENST00000384980 68 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 IFNNP1-201ENST00000429219 553 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AL445584.1-201ENST00000431451 330 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 PRELID3BP10-201ENST00000431957 584 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 TBCAP1-201ENST00000436520 327 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 RPL21P134-201ENST00000453468 483 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 VN1R40P-201ENST00000455196 941 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AL133477.1-201ENST00000457472 514 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 OR9M1P-201ENST00000459641 921 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 RPL5P24-201ENST00000463742 885 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC091564.1-201ENST00000464563 479 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC034236.1-201ENST00000469891 373 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP41Q3LFD5 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC110792.2-201ENST00000510278 224 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 RNU7-143P-201ENST00000516781 65 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 MTND2P38-201ENST00000522536 667 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 ZNF321P-202ENST00000550843 495 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AL354943.1-201ENST00000572103 781 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC112230.1-201ENST00000604342 547 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AL451044.1-201ENST00000604867 238 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 HMGB1P50-201ENST00000605814 607 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC121761.2-201ENST00000617300 689 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC069209.1-201ENST00000619282 651 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC233309.1-201ENST00000619522 751 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC091304.6-201ENST00000619761 202 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC039056.2-201ENST00000622261 511 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 CR392039.5-201ENST00000623201 510 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC112200.1-201ENST00000625015 234 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP41Q3LFD5 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP41Q3LFD5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.3□□□□□ -1.72
USP41Q3LFD5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
USP41Q3LFD5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP41Q3LFD5 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP41Q3LFD5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC025125.1-201ENST00000624743 1922 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP41Q3LFD5 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP41Q3LFD5 Y_RNA.408-201ENST00000383987 102 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC119751.3-201ENST00000399720 670 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 JKAMPP1-201ENST00000413804 919 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms