Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXG1P55316 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXG1P55316 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
FOXG1P55316 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXG1P55316 CCT8P1-201ENST00000413611 1657 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXG1P55316 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXG1P55316 Z99496.1-201ENST00000469424 1477 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 MAPK10-263ENST00000641052 4307 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 RPL21P132-201ENST00000331267 462 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 RNU6-1090P-201ENST00000364065 94 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXG1P55316 RNU6-452P-201ENST00000384406 107 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 SNORA40.3-201ENST00000390964 122 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 RNU6-780P-201ENST00000391030 104 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 AP000580.1-201ENST00000404439 358 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 RN7SKP216-201ENST00000411050 312 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 EEF1A1P40-201ENST00000412883 573 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXG1P55316 AL590609.2-201ENST00000421430 368 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 AL513174.1-201ENST00000423182 629 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 AC093698.1-201ENST00000423843 571 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXG1P55316 ELOCP14-201ENST00000428070 331 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 ELOCP7-201ENST00000439968 331 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXG1P55316 AC022431.1-201ENST00000450941 438 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXG1P55316 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXG1P55316 AC111000.3-201ENST00000508057 576 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 AC091133.4-201ENST00000511142 308 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
FOXG1P55316 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXG1P55316 RNU6-358P-201ENST00000516564 75 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXG1P55316 AP002748.2-201ENST00000528671 348 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXG1P55316 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXG1P55316 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXG1P55316 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXG1P55316 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXG1P55316 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.07□□□□□ -1.76
FOXG1P55316 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXG1P55316 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXG1P55316 AC234771.5-201ENST00000600161 514 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXG1P55316 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXG1P55316 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXG1P55316 AL592182.3-201ENST00000642132 3304 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXG1P55316 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
FOXG1P55316 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXG1P55316 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXG1P55316 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXG1P55316 AC000374.1-201ENST00000434698 1745 ntBASIC4.07□□□□□ -1.76
FOXG1P55316 AC107068.1-201ENST00000563286 4218 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXG1P55316 AL391684.1-202ENST00000641293 1636 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXG1P55316 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXG1P55316 ZFRP1-201ENST00000457579 2970 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
FOXG1P55316 DHX40P1-201ENST00000588725 1412 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 HSPA8P17-201ENST00000427029 1382 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
FOXG1P55316 AC092079.1-201ENST00000558620 1985 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
FOXG1P55316 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
FOXG1P55316 RNY4P14-201ENST00000363656 96 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 RNA5SP88-201ENST00000365560 109 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXG1P55316 RNA5SP397-201ENST00000391323 118 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 Y_RNA.625-201ENST00000411256 107 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 CTSL3P-202ENST00000412179 788 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 RPL17P12-201ENST00000413391 526 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXG1P55316 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXG1P55316 AIMP1P1-201ENST00000418670 937 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXG1P55316 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXG1P55316 OFD1P18Y-201ENST00000420889 959 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXG1P55316 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXG1P55316 AC073464.1-201ENST00000429823 534 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 MTCO3P21-201ENST00000430791 643 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 ATP5HP2-201ENST00000433885 485 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXG1P55316 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXG1P55316 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.06□□□□□ -1.76
FOXG1P55316 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 AC007677.1-201ENST00000445757 515 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 ARL2BPP10-201ENST00000446487 531 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 PDSS1P2-201ENST00000449397 678 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXG1P55316 DNAJC19P8-201ENST00000452887 259 ntBASIC4.06□□□□□ -1.76
FOXG1P55316 SCARNA10-201ENST00000459255 330 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms