Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU6-88P-201ENST00000606801 100 ntBASIC4.08□□□□□ -1.76
CDH12P55289 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH12P55289 AC078899.5-201ENST00000612475 178 ntBASIC4.08□□□□□ -1.76
CDH12P55289 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH12P55289 MIR6864-201ENST00000617935 70 ntBASIC4.08□□□□□ -1.76
CDH12P55289 AC009509.4-201ENST00000619202 509 ntBASIC4.08□□□□□ -1.76
CDH12P55289 AC105074.1-201ENST00000623380 3095 ntBASIC4.08□□□□□ -1.76
CDH12P55289 AC006065.6-201ENST00000625201 545 ntBASIC4.08□□□□□ -1.76
CDH12P55289 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH12P55289 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH12P55289 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH12P55289 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CDH12P55289 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH12P55289 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH12P55289 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH12P55289 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
CDH12P55289 AC016588.2-201ENST00000632484 3021 ntBASIC4.07□□□□□ -1.76
CDH12P55289 MTND4P16-201ENST00000466108 1367 ntBASIC4.07□□□□□ -1.76
CDH12P55289 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH12P55289 OR10J6P-201ENST00000289731 930 ntBASIC4.07□□□□□ -1.76
CDH12P55289 RNU6-462P-201ENST00000362659 105 ntBASIC4.07□□□□□ -1.76
CDH12P55289 RHOT1P2-201ENST00000366423 333 ntBASIC4.07□□□□□ -1.76
CDH12P55289 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH12P55289 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.07□□□□□ -1.76
CDH12P55289 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH12P55289 RNA5SP397-201ENST00000391323 118 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AL121972.1-201ENST00000402023 252 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AL049697.2-201ENST00000403708 294 ntBASIC4.07□□□□□ -1.76
CDH12P55289 ZNF603P-201ENST00000405613 487 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH12P55289 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH12P55289 RPL12P34-201ENST00000424532 479 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AL590762.4-201ENST00000425885 253 ntBASIC4.07□□□□□ -1.76
CDH12P55289 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH12P55289 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH12P55289 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH12P55289 AL353597.2-202ENST00000434901 373 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH12P55289 RPL23AP16-201ENST00000441715 421 ntBASIC4.07□□□□□ -1.76
CDH12P55289 COX6CP12-201ENST00000446748 202 ntBASIC4.07□□□□□ -1.76
CDH12P55289 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH12P55289 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH12P55289 SNRPGP9-201ENST00000456025 225 ntBASIC4.07□□□□□ -1.76
CDH12P55289 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.07□□□□□ -1.76
CDH12P55289 PPIAP21-201ENST00000464473 501 ntBASIC4.07□□□□□ -1.76
CDH12P55289 RPS15AP17-201ENST00000470598 390 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AC093270.2-201ENST00000486157 792 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AC005726.1-201ENST00000494679 427 ntBASIC4.07□□□□□ -1.76
CDH12P55289 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CDH12P55289 AC090071.1-201ENST00000507713 644 ntBASIC4.07□□□□□ -1.76
CDH12P55289 CBX3P3-201ENST00000508108 532 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AC026412.2-201ENST00000512270 1075 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH12P55289 IGKV1-32-201ENST00000519290 311 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AP000873.5-201ENST00000533906 236 ntBASIC4.07□□□□□ -1.76
CDH12P55289 PDCD5P1-201ENST00000543528 309 ntBASIC4.07□□□□□ -1.76
CDH12P55289 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH12P55289 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH12P55289 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH12P55289 AL133457.1-201ENST00000564251 987 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH12P55289 MIR4637-201ENST00000582405 84 ntBASIC4.07□□□□□ -1.76
CDH12P55289 MIR3611-201ENST00000584484 83 ntBASIC4.07□□□□□ -1.76
CDH12P55289 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH12P55289 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH12P55289 AC008638.3-201ENST00000603341 463 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AC115286.1-201ENST00000604298 434 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH12P55289 FAM25E-202ENST00000608562 189 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AC020634.1-201ENST00000608701 549 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AC012360.2-201ENST00000609349 391 ntBASIC4.07□□□□□ -1.76
CDH12P55289 AC025594.3-201ENST00000613068 790 ntBASIC4.07□□□□□ -1.76
CDH12P55289 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH12P55289 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CDH12P55289 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH12P55289 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH12P55289 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH12P55289 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDH12P55289 AL031985.3-201ENST00000565390 2449 ntBASIC4.06□□□□□ -1.76
CDH12P55289 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.06□□□□□ -1.76
CDH12P55289 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH12P55289 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH12P55289 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.06□□□□□ -1.76
CDH12P55289 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
CDH12P55289 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CDH12P55289 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CDH12P55289 MIR93-201ENST00000385024 80 ntBASIC4.06□□□□□ -1.76
CDH12P55289 ARF4P3-201ENST00000397387 509 ntBASIC4.06□□□□□ -1.76
CDH12P55289 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH12P55289 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH12P55289 AL133384.1-201ENST00000412744 351 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AL139128.1-201ENST00000413921 941 ntBASIC4.06□□□□□ -1.76
CDH12P55289 MTCO3P41-201ENST00000414801 328 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH12P55289 RPL7P30-201ENST00000420888 709 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AL590609.2-201ENST00000421430 368 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AC096632.1-201ENST00000427395 310 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AL512649.1-201ENST00000428997 581 ntBASIC4.06□□□□□ -1.76
CDH12P55289 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH12P55289 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms