Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MTND5P2-201ENST00000442927 1142 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 HSPE1P28-201ENST00000443139 211 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 RPL36AP15-201ENST00000444514 266 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.31□□□□□ -1.72
NR1H2P55055 Z83846.1-201ENST00000446798 265 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 AC073264.2-201ENST00000448886 166 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.31□□□□□ -1.72
NR1H2P55055 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.31□□□□□ -1.72
NR1H2P55055 AL513533.1-201ENST00000453728 415 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.31□□□□□ -1.72
NR1H2P55055 AP000873.1-201ENST00000463987 400 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 RN7SL385P-201ENST00000468873 276 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H2P55055 BET1P1-201ENST00000482276 359 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NR1H2P55055 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.31□□□□□ -1.72
NR1H2P55055 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.31□□□□□ -1.72
NR1H2P55055 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.31□□□□□ -1.72
NR1H2P55055 AC022861.1-201ENST00000522981 663 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 DEFB131D-201ENST00000526803 184 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H2P55055 AL139174.1-201ENST00000531489 886 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.31□□□□□ -1.72
NR1H2P55055 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.31□□□□□ -1.72
NR1H2P55055 EEF1B2P4-201ENST00000551398 348 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.31□□□□□ -1.72
NR1H2P55055 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.31□□□□□ -1.72
NR1H2P55055 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.31□□□□□ -1.72
NR1H2P55055 LARP7P2-201ENST00000575306 125 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 MAGOH2P-202ENST00000584384 429 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.31□□□□□ -1.72
NR1H2P55055 AC006539.2-201ENST00000601729 572 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 AC025588.4-201ENST00000615802 908 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H2P55055 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.31□□□□□ -1.72
NR1H2P55055 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.31□□□□□ -1.72
NR1H2P55055 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H2P55055 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.31□□□□□ -1.72
NR1H2P55055 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H2P55055 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H2P55055 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NR1H2P55055 AP002907.1-201ENST00000606361 1430 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NR1H2P55055 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NR1H2P55055 MTND4P34-201ENST00000572715 1371 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
NR1H2P55055 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NR1H2P55055 OR11H5P-202ENST00000641612 1325 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 RNA5SP502-201ENST00000362694 119 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 SNORA62-201ENST00000365493 153 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 RNA5SP151-201ENST00000365632 117 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NR1H2P55055 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NR1H2P55055 RNU1-44P-201ENST00000384453 163 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 RNU2-15P-201ENST00000410692 191 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 JKAMPP1-201ENST00000413804 919 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 AC119751.6-201ENST00000416712 186 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 MTATP6P27-201ENST00000416987 621 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 MTCYBP38-201ENST00000417160 1123 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.3□□□□□ -1.72
NR1H2P55055 AC009480.2-201ENST00000422916 432 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.3□□□□□ -1.72
NR1H2P55055 AC019178.2-201ENST00000423595 505 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 AC068287.1-201ENST00000430283 295 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 RPS6P12-201ENST00000432491 726 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.3□□□□□ -1.72
NR1H2P55055 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.3□□□□□ -1.72
NR1H2P55055 SETP8-201ENST00000435341 628 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.3□□□□□ -1.72
NR1H2P55055 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.3□□□□□ -1.72
NR1H2P55055 AC000111.2-201ENST00000448200 210 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 TPT1P12-201ENST00000448968 492 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 AC011005.3-201ENST00000491624 395 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.3□□□□□ -1.72
NR1H2P55055 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
NR1H2P55055 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.3□□□□□ -1.72
NR1H2P55055 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.3□□□□□ -1.72
NR1H2P55055 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.3□□□□□ -1.72
NR1H2P55055 AC006499.2-201ENST00000513470 337 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.3□□□□□ -1.72
NR1H2P55055 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.3□□□□□ -1.72
NR1H2P55055 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.3□□□□□ -1.72
NR1H2P55055 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.3□□□□□ -1.72
NR1H2P55055 AC107016.1-201ENST00000550463 337 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.3□□□□□ -1.72
NR1H2P55055 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.3□□□□□ -1.72
NR1H2P55055 AC010928.3-201ENST00000587712 541 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.3□□□□□ -1.72
NR1H2P55055 AL109653.1-201ENST00000603091 248 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 AC013444.2-201ENST00000603317 787 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 AC103881.1-201ENST00000603476 538 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 MIR6780A-201ENST00000615089 68 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NR1H2P55055 AC103706.2-201ENST00000638080 240 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NR1H2P55055 AC018555.1-201ENST00000567548 1980 ntBASIC4.3□□□□□ -1.72
NR1H2P55055 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
NR1H2P55055 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms