Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC126365.2-201ENST00000580630 379 ntBASIC4.06□□□□□ -1.76
CTNNA1P35221 AC107982.3-201ENST00000584957 985 ntBASIC4.06□□□□□ -1.76
CTNNA1P35221 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTNNA1P35221 ARF4P1-201ENST00000605447 541 ntBASIC4.06□□□□□ -1.76
CTNNA1P35221 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.06□□□□□ -1.76
CTNNA1P35221 AC008083.4-201ENST00000615076 444 ntBASIC4.06□□□□□ -1.76
CTNNA1P35221 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CTNNA1P35221 AC018755.4-201ENST00000619715 454 ntBASIC4.06□□□□□ -1.76
CTNNA1P35221 AC092650.2-201ENST00000619984 902 ntBASIC4.06□□□□□ -1.76
CTNNA1P35221 AC109454.4-201ENST00000623411 649 ntBASIC4.06□□□□□ -1.76
CTNNA1P35221 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.06□□□□□ -1.76
CTNNA1P35221 ZNF663P-202ENST00000641770 1131 ntBASIC4.06□□□□□ -1.76
CTNNA1P35221 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CTNNA1P35221 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTNNA1P35221 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTNNA1P35221 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTNNA1P35221 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.05□□□□□ -1.76
CTNNA1P35221 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTNNA1P35221 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTNNA1P35221 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.05□□□□□ -1.76
CTNNA1P35221 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CTNNA1P35221 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 RNA5SP295-201ENST00000362655 121 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.05□□□□□ -1.76
CTNNA1P35221 SNORA51.6-201ENST00000384151 125 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 PTMAP5-201ENST00000393073 333 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CTNNA1P35221 AC007390.1-201ENST00000415722 356 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 RPL18P10-201ENST00000425606 538 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 HMGB3P5-201ENST00000428894 612 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.05□□□□□ -1.76
CTNNA1P35221 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.05□□□□□ -1.76
CTNNA1P35221 SKP1P1-201ENST00000438081 489 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 HMGN1P5-201ENST00000448591 263 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 AC015908.1-201ENST00000478739 476 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.05□□□□□ -1.76
CTNNA1P35221 RPS23P1-201ENST00000491662 432 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.05□□□□□ -1.76
CTNNA1P35221 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.05□□□□□ -1.76
CTNNA1P35221 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.05□□□□□ -1.76
CTNNA1P35221 AC008837.1-201ENST00000511513 412 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTNNA1P35221 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.05□□□□□ -1.76
CTNNA1P35221 RN7SKP83-201ENST00000516512 178 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 RNA5SP468-201ENST00000516782 93 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.05□□□□□ -1.76
CTNNA1P35221 SUMO2P20-201ENST00000520803 283 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 MTND1P36-201ENST00000522384 936 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.05□□□□□ -1.76
CTNNA1P35221 OR4A12P-201ENST00000530847 918 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.05□□□□□ -1.76
CTNNA1P35221 AC087481.2-201ENST00000565492 330 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 AC122134.1-202ENST00000569111 1201 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.05□□□□□ -1.76
CTNNA1P35221 AC008507.2-201ENST00000588402 1176 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 AC092954.1-201ENST00000609121 445 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 AC073530.2-201ENST00000623987 261 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.05□□□□□ -1.76
CTNNA1P35221 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTNNA1P35221 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTNNA1P35221 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CTNNA1P35221 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTNNA1P35221 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.05□□□□□ -1.76
CTNNA1P35221 AC024560.2-201ENST00000507981 1497 ntBASIC4.05□□□□□ -1.76
CTNNA1P35221 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
CTNNA1P35221 MTND4P34-201ENST00000572715 1371 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 AC010733.2-201ENST00000589496 5702 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.04□□□□□ -1.76
CTNNA1P35221 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CTNNA1P35221 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTNNA1P35221 RNU6-1066P-201ENST00000363573 105 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 RNU6-236P-201ENST00000363886 106 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 RNU1-32P-201ENST00000363937 159 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTNNA1P35221 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.04□□□□□ -1.76
CTNNA1P35221 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTNNA1P35221 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.04□□□□□ -1.76
CTNNA1P35221 RNU6-712P-201ENST00000410558 100 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 AL691449.1-201ENST00000426570 421 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 SETP5-201ENST00000437270 562 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.04□□□□□ -1.76
CTNNA1P35221 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.04□□□□□ -1.76
CTNNA1P35221 NUTF2P3-201ENST00000448540 384 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 COX6CP18-201ENST00000448769 222 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTNNA1P35221 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.04□□□□□ -1.76
CTNNA1P35221 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.04□□□□□ -1.76
CTNNA1P35221 AC093267.1-201ENST00000489176 961 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTNNA1P35221 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.04□□□□□ -1.76
CTNNA1P35221 AC108064.1-201ENST00000513791 460 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 AC034205.1-201ENST00000520621 638 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.04□□□□□ -1.76
CTNNA1P35221 AC138701.1-201ENST00000524329 714 ntBASIC4.04□□□□□ -1.76
CTNNA1P35221 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.04□□□□□ -1.76
CTNNA1P35221 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.04□□□□□ -1.76
CTNNA1P35221 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms