Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 HMGN1P36-201ENST00000446623 298 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 PTMAP3-201ENST00000447474 330 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.12□□□□□ -1.59
COL6A2P12110 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL6A2P12110 RPL7P15-201ENST00000461190 712 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 AL133445.1-201ENST00000467051 452 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 RN7SL174P-201ENST00000475578 289 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.12□□□□□ -1.59
COL6A2P12110 RN7SL441P-201ENST00000492388 296 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 RN7SL101P-201ENST00000496350 279 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.12□□□□□ -1.59
COL6A2P12110 AC093677.1-201ENST00000514414 678 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.12□□□□□ -1.59
COL6A2P12110 Vault.3-201ENST00000516676 95 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.12□□□□□ -1.59
COL6A2P12110 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.12□□□□□ -1.59
COL6A2P12110 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.12□□□□□ -1.59
COL6A2P12110 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.12□□□□□ -1.59
COL6A2P12110 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.12□□□□□ -1.59
COL6A2P12110 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.12□□□□□ -1.59
COL6A2P12110 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.12□□□□□ -1.59
COL6A2P12110 AC009101.1-201ENST00000568135 242 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.12□□□□□ -1.59
COL6A2P12110 MIR4443-201ENST00000585052 53 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.12□□□□□ -1.59
COL6A2P12110 AC123786.2-201ENST00000603459 275 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 AL009028.1-201ENST00000604895 802 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 AP003117.2-201ENST00000606010 545 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 AL158211.4-201ENST00000606988 584 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 OR10AB1P-201ENST00000609613 938 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 RNU6-156P-201ENST00000621869 107 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 AC015908.5-201ENST00000623289 343 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.12□□□□□ -1.59
COL6A2P12110 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.12□□□□□ -1.59
COL6A2P12110 CYP3A51P-201ENST00000633513 256 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL6A2P12110 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.12□□□□□ -1.59
COL6A2P12110 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL6A2P12110 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.12□□□□□ -1.59
COL6A2P12110 AC024560.2-201ENST00000507981 1497 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 AC097714.1-201ENST00000511272 1647 ntBASIC5.12□□□□□ -1.59
COL6A2P12110 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL6A2P12110 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL6A2P12110 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL6A2P12110 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL6A2P12110 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL6A2P12110 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL6A2P12110 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL6A2P12110 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL6A2P12110 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL6A2P12110 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.11□□□□□ -1.59
COL6A2P12110 AL161781.1-201ENST00000354277 403 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 U3.3-201ENST00000362986 216 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 RNU6-282P-201ENST00000365357 103 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 AL359643.1-201ENST00000404109 423 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 AC078974.1-201ENST00000411597 223 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 RPL6P29-201ENST00000414863 865 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 SNRPEP10-201ENST00000420249 274 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.11□□□□□ -1.59
COL6A2P12110 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.11□□□□□ -1.59
COL6A2P12110 LYPLA1P1-201ENST00000434514 622 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 AC104850.1-201ENST00000435940 476 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.11□□□□□ -1.59
COL6A2P12110 RPL7AP61-201ENST00000443410 636 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.11□□□□□ -1.59
COL6A2P12110 RPL7P39-201ENST00000481157 744 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.11□□□□□ -1.59
COL6A2P12110 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.11□□□□□ -1.59
COL6A2P12110 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.11□□□□□ -1.59
COL6A2P12110 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.11□□□□□ -1.59
COL6A2P12110 TXNP6-201ENST00000510190 310 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.11□□□□□ -1.59
COL6A2P12110 RPL23AP53-201ENST00000521854 457 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 CBX3P5-201ENST00000552017 521 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.11□□□□□ -1.59
COL6A2P12110 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.11□□□□□ -1.59
COL6A2P12110 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.11□□□□□ -1.59
COL6A2P12110 NDUFB4P11-201ENST00000560510 395 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.11□□□□□ -1.59
COL6A2P12110 AC099489.2-201ENST00000574976 260 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.11□□□□□ -1.59
COL6A2P12110 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.11□□□□□ -1.59
COL6A2P12110 NRBF2P5-201ENST00000603087 788 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 AC016727.1-205ENST00000605437 569 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 AL008729.2-201ENST00000606393 473 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 RN7SL787P-201ENST00000613000 284 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.11□□□□□ -1.59
COL6A2P12110 AC126175.1-201ENST00000617041 758 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 AL691477.1-201ENST00000624398 162 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 AC006065.6-201ENST00000625201 545 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL6A2P12110 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL6A2P12110 PANDAR-201ENST00000629595 1506 ntBASIC5.11□□□□□ -1.59
COL6A2P12110 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL6A2P12110 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.11□□□□□ -1.59
COL6A2P12110 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL6A2P12110 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL6A2P12110 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL6A2P12110 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL6A2P12110 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms