Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RBMY2UP-201ENST00000453474 324 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 OR7L1P-201ENST00000456181 380 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 AC104629.2-201ENST00000468627 598 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 MTCO3P35-201ENST00000485582 781 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.41□□□□□ -2.02
CXCL1P09341 DYNLL1P6-201ENST00000503440 264 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.41□□□□□ -2.02
CXCL1P09341 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.41□□□□□ -2.02
CXCL1P09341 RNU6-826P-201ENST00000516827 104 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.41□□□□□ -2.02
CXCL1P09341 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.41□□□□□ -2.02
CXCL1P09341 AC103843.2-201ENST00000530523 682 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 OR8R1P-201ENST00000543943 764 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.41□□□□□ -2.02
CXCL1P09341 SETP2-201ENST00000553886 926 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CXCL1P09341 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.41□□□□□ -2.02
CXCL1P09341 HSPE1P5-201ENST00000561489 272 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.41□□□□□ -2.02
CXCL1P09341 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.41□□□□□ -2.02
CXCL1P09341 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CXCL1P09341 RNA5SP196-201ENST00000625967 102 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.41□□□□□ -2.02
CXCL1P09341 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.41□□□□□ -2.02
CXCL1P09341 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.41□□□□□ -2.02
CXCL1P09341 AC103988.1-201ENST00000566382 2177 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CXCL1P09341 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CXCL1P09341 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.41□□□□□ -2.02
CXCL1P09341 AC009487.2-201ENST00000420969 6821 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CXCL1P09341 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.41□□□□□ -2.02
CXCL1P09341 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.02
CXCL1P09341 AC073055.1-201ENST00000456901 1621 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 MAPK10-322ENST00000641485 4530 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CXCL1P09341 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CXCL1P09341 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CXCL1P09341 U8.11-201ENST00000384699 133 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 U8.12-201ENST00000384701 133 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 AL138880.1-201ENST00000405824 642 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 NUP35P2-201ENST00000416748 943 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.4□□□□□ -2.03
CXCL1P09341 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.4□□□□□ -2.03
CXCL1P09341 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.4□□□□□ -2.03
CXCL1P09341 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.4□□□□□ -2.03
CXCL1P09341 AC023512.1-201ENST00000444513 499 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 AC093392.2-201ENST00000450682 337 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 ELOCP23-201ENST00000452014 332 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 BX276092.4-201ENST00000452056 248 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.4□□□□□ -2.03
CXCL1P09341 RPS15AP1-201ENST00000457423 391 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 U8.18-201ENST00000459285 133 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 RN7SL297P-201ENST00000483161 293 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.4□□□□□ -2.03
CXCL1P09341 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CXCL1P09341 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.4□□□□□ -2.03
CXCL1P09341 AC117525.1-201ENST00000515228 503 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 MTCO1P35-201ENST00000515270 228 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 IGKV2-36-201ENST00000519999 223 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 EIF4EP5-201ENST00000528228 640 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
CXCL1P09341 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.4□□□□□ -2.03
CXCL1P09341 AC022916.3-201ENST00000592961 742 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 AC015802.5-201ENST00000607478 399 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 AL023583.1-201ENST00000607518 1143 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.4□□□□□ -2.03
CXCL1P09341 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.4□□□□□ -2.03
CXCL1P09341 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.4□□□□□ -2.03
CXCL1P09341 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CXCL1P09341 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.4□□□□□ -2.03
CXCL1P09341 AL365440.1-201ENST00000436135 2167 ntBASIC2.4□□□□□ -2.03
CXCL1P09341 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
CXCL1P09341 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.39□□□□□ -2.03
CXCL1P09341 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.39□□□□□ -2.03
CXCL1P09341 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CXCL1P09341 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CXCL1P09341 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CXCL1P09341 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CXCL1P09341 RPS15AP40-201ENST00000419621 391 ntBASIC2.39□□□□□ -2.03
CXCL1P09341 AL035423.1-201ENST00000420331 213 ntBASIC2.39□□□□□ -2.03
CXCL1P09341 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.39□□□□□ -2.03
CXCL1P09341 RPL21P40-201ENST00000428586 483 ntBASIC2.39□□□□□ -2.03
CXCL1P09341 ATP5JP1-201ENST00000431631 322 ntBASIC2.39□□□□□ -2.03
CXCL1P09341 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.39□□□□□ -2.03
CXCL1P09341 OR6K1P-201ENST00000456766 971 ntBASIC2.39□□□□□ -2.03
CXCL1P09341 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.39□□□□□ -2.03
CXCL1P09341 AL161747.1-201ENST00000480068 358 ntBASIC2.39□□□□□ -2.03
CXCL1P09341 AC068724.1-201ENST00000487100 792 ntBASIC2.39□□□□□ -2.03
CXCL1P09341 RN7SL633P-201ENST00000488974 297 ntBASIC2.39□□□□□ -2.03
CXCL1P09341 AP001025.2-201ENST00000490908 477 ntBASIC2.39□□□□□ -2.03
CXCL1P09341 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.39□□□□□ -2.03
CXCL1P09341 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.39□□□□□ -2.03
CXCL1P09341 MTND2P26-201ENST00000528255 1029 ntBASIC2.39□□□□□ -2.03
CXCL1P09341 AC004486.1-201ENST00000546846 233 ntBASIC2.39□□□□□ -2.03
CXCL1P09341 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.39□□□□□ -2.03
CXCL1P09341 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.39□□□□□ -2.03
CXCL1P09341 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.39□□□□□ -2.03
CXCL1P09341 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.39□□□□□ -2.03
CXCL1P09341 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms