Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.71□□□□□ -1.98
SNRNP200O75643 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.71□□□□□ -1.98
SNRNP200O75643 RNU6-1231P-201ENST00000517185 103 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 HIGD1AP10-201ENST00000527837 282 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SNRNP200O75643 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.71□□□□□ -1.98
SNRNP200O75643 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.71□□□□□ -1.98
SNRNP200O75643 AL845331.3-202ENST00000562856 261 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 AC009318.3-201ENST00000616916 503 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 AP006248.2-201ENST00000623309 592 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 AC004943.3-201ENST00000624116 600 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 AC002546.1-201ENST00000588041 2504 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.7□□□□□ -1.98
SNRNP200O75643 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.7□□□□□ -1.98
SNRNP200O75643 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNRNP200O75643 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SNRNP200O75643 U3.12-201ENST00000364498 214 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SNRNP200O75643 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.7□□□□□ -1.98
SNRNP200O75643 COTL1P1-201ENST00000422309 375 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 RNF19BPX-201ENST00000426224 625 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 VN1R96P-201ENST00000446052 858 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 TVP23BP2-201ENST00000455082 615 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 RN7SL633P-201ENST00000488974 297 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 SNX5P1-201ENST00000505757 1041 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 AC117522.3-201ENST00000507974 584 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 NDUFB4P9-201ENST00000511646 388 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 USP9YP5-201ENST00000511770 630 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 RNA5SP367-201ENST00000516557 118 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 FAM60DP-201ENST00000524174 632 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.7□□□□□ -1.98
SNRNP200O75643 AL591516.1-201ENST00000611326 274 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.7□□□□□ -1.98
SNRNP200O75643 CFTRP2-201ENST00000634304 199 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNRNP200O75643 AC092593.1-201ENST00000515413 1815 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 AC090229.1-201ENST00000590983 1609 ntBASIC2.7□□□□□ -1.98
SNRNP200O75643 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
SNRNP200O75643 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNRNP200O75643 RNU6-851P-201ENST00000384565 107 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.69□□□□□ -1.98
SNRNP200O75643 AC022018.1-201ENST00000430685 241 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.69□□□□□ -1.98
SNRNP200O75643 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.69□□□□□ -1.98
SNRNP200O75643 HMGN2P7-201ENST00000456186 273 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.69□□□□□ -1.98
SNRNP200O75643 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.69□□□□□ -1.98
SNRNP200O75643 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.69□□□□□ -1.98
SNRNP200O75643 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.69□□□□□ -1.98
SNRNP200O75643 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.69□□□□□ -1.98
SNRNP200O75643 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNRNP200O75643 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SNRNP200O75643 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.69□□□□□ -1.98
SNRNP200O75643 AL138827.1-201ENST00000402666 306 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.69□□□□□ -1.98
SNRNP200O75643 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.69□□□□□ -1.98
SNRNP200O75643 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.69□□□□□ -1.98
SNRNP200O75643 RPL7P31-201ENST00000450192 724 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.69□□□□□ -1.98
SNRNP200O75643 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.69□□□□□ -1.98
SNRNP200O75643 AL049830.2-201ENST00000480072 201 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 AC126121.1-201ENST00000482313 553 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 AC078817.1-201ENST00000492623 435 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.69□□□□□ -1.98
SNRNP200O75643 SCGB1D5P-201ENST00000515134 247 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.69□□□□□ -1.98
SNRNP200O75643 HMGB1P6-201ENST00000569046 646 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 AC006504.3-201ENST00000586818 523 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.69□□□□□ -1.98
SNRNP200O75643 AC007423.1-201ENST00000605009 627 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SNRNP200O75643 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.69□□□□□ -1.98
SNRNP200O75643 ZNF826P-207ENST00000622273 1910 ntBASIC2.69□□□□□ -1.98
SNRNP200O75643 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SNRNP200O75643 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
SNRNP200O75643 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SNRNP200O75643 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SNRNP200O75643 EI24P2-201ENST00000397776 1076 ntBASIC2.68□□□□□ -1.98
SNRNP200O75643 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.68□□□□□ -1.98
SNRNP200O75643 USP9YP7-201ENST00000436723 430 ntBASIC2.68□□□□□ -1.98
SNRNP200O75643 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.68□□□□□ -1.98
SNRNP200O75643 AL831737.1-201ENST00000441288 271 ntBASIC2.68□□□□□ -1.98
SNRNP200O75643 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SNRNP200O75643 USP9YP32-201ENST00000452432 430 ntBASIC2.68□□□□□ -1.98
SNRNP200O75643 HMGB3P21-201ENST00000452483 547 ntBASIC2.68□□□□□ -1.98
SNRNP200O75643 AL109933.2-201ENST00000452651 260 ntBASIC2.68□□□□□ -1.98
SNRNP200O75643 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.68□□□□□ -1.98
SNRNP200O75643 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.68□□□□□ -1.98
SNRNP200O75643 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.68□□□□□ -1.98
SNRNP200O75643 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.68□□□□□ -1.98
SNRNP200O75643 AC091515.1-201ENST00000548110 679 ntBASIC2.68□□□□□ -1.98
SNRNP200O75643 MIR7106-201ENST00000612419 65 ntBASIC2.68□□□□□ -1.98
SNRNP200O75643 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.68□□□□□ -1.98
SNRNP200O75643 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.68□□□□□ -1.98
SNRNP200O75643 U6.98-201ENST00000637157 84 ntBASIC2.68□□□□□ -1.98
SNRNP200O75643 AC091152.2-201ENST00000591628 2569 ntBASIC2.68□□□□□ -1.98
SNRNP200O75643 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SNRNP200O75643 MIR634-201ENST00000385208 97 ntBASIC2.68□□□□□ -1.98
SNRNP200O75643 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms