Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.88□□□□□ -1.79
SSX4O60224 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX4O60224 AC105129.1-201ENST00000560250 297 ntBASIC3.88□□□□□ -1.79
SSX4O60224 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX4O60224 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.88□□□□□ -1.79
SSX4O60224 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX4O60224 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX4O60224 IPO5P1-202ENST00000600039 287 ntBASIC3.88□□□□□ -1.79
SSX4O60224 VN1R82P-201ENST00000601481 356 ntBASIC3.88□□□□□ -1.79
SSX4O60224 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX4O60224 ELOCP35-201ENST00000604289 336 ntBASIC3.88□□□□□ -1.79
SSX4O60224 AC115286.1-201ENST00000604298 434 ntBASIC3.88□□□□□ -1.79
SSX4O60224 AL513477.2-201ENST00000607858 568 ntBASIC3.88□□□□□ -1.79
SSX4O60224 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX4O60224 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX4O60224 AC017037.3-201ENST00000625016 472 ntBASIC3.88□□□□□ -1.79
SSX4O60224 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX4O60224 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.88□□□□□ -1.79
SSX4O60224 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSX4O60224 LINC02471-203ENST00000641941 4752 ntBASIC3.88□□□□□ -1.79
SSX4O60224 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
SSX4O60224 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSX4O60224 MFSD8-242ENST00000641690 4199 ntBASIC3.88□□□□□ -1.79
SSX4O60224 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX4O60224 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX4O60224 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSX4O60224 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX4O60224 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
SSX4O60224 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX4O60224 Y_RNA.126-201ENST00000363382 111 ntBASIC3.87□□□□□ -1.79
SSX4O60224 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSX4O60224 RSL24D1P4-201ENST00000400938 484 ntBASIC3.87□□□□□ -1.79
SSX4O60224 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX4O60224 AC011933.1-201ENST00000413334 321 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX4O60224 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX4O60224 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX4O60224 RPS25P9-201ENST00000435591 252 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AL356276.2-201ENST00000435919 558 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AF228730.2-201ENST00000438784 848 ntBASIC3.87□□□□□ -1.79
SSX4O60224 RPL23AP33-201ENST00000442301 452 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX4O60224 RPL29P29-201ENST00000448725 423 ntBASIC3.87□□□□□ -1.79
SSX4O60224 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX4O60224 TRGVB-201ENST00000453257 471 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX4O60224 VN1R40P-201ENST00000455196 941 ntBASIC3.87□□□□□ -1.79
SSX4O60224 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX4O60224 AC116533.1-201ENST00000459748 321 ntBASIC3.87□□□□□ -1.79
SSX4O60224 RN7SL303P-201ENST00000469773 251 ntBASIC3.87□□□□□ -1.79
SSX4O60224 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SSX4O60224 AC004263.1-201ENST00000479327 332 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
SSX4O60224 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX4O60224 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX4O60224 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX4O60224 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.87□□□□□ -1.79
SSX4O60224 MTCO1P35-201ENST00000515270 228 ntBASIC3.87□□□□□ -1.79
SSX4O60224 RNU6-583P-201ENST00000516012 92 ntBASIC3.87□□□□□ -1.79
SSX4O60224 RN7SKP21-201ENST00000516503 220 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX4O60224 OR5AK1P-201ENST00000524837 922 ntBASIC3.87□□□□□ -1.79
SSX4O60224 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SSX4O60224 CBX3P5-201ENST00000552017 521 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX4O60224 AL352979.3-201ENST00000553515 247 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX4O60224 MIR3138-201ENST00000585238 82 ntBASIC3.87□□□□□ -1.79
SSX4O60224 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX4O60224 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.87□□□□□ -1.79
SSX4O60224 AC103881.1-201ENST00000603476 538 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AL031281.1-201ENST00000604049 488 ntBASIC3.87□□□□□ -1.79
SSX4O60224 DPRXP5-201ENST00000604662 539 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AL592221.1-201ENST00000605266 382 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AL450489.1-201ENST00000612071 468 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AL139418.1-201ENST00000613613 177 ntBASIC3.87□□□□□ -1.79
SSX4O60224 AC114781.5-201ENST00000615297 108 ntBASIC3.87□□□□□ -1.79
SSX4O60224 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX4O60224 AC007490.1-201ENST00000624321 703 ntBASIC3.87□□□□□ -1.79
SSX4O60224 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX4O60224 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX4O60224 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX4O60224 OR6C71P-202ENST00000641886 1107 ntBASIC3.87□□□□□ -1.79
SSX4O60224 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSX4O60224 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSX4O60224 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSX4O60224 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSX4O60224 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
SSX4O60224 AC104454.1-201ENST00000421341 1401 ntBASIC3.87□□□□□ -1.79
SSX4O60224 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSX4O60224 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX4O60224 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSX4O60224 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SSX4O60224 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSX4O60224 AL390862.1-201ENST00000635467 1469 ntBASIC3.86□□□□□ -1.79
SSX4O60224 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSX4O60224 PABPC1P7-201ENST00000413177 1513 ntBASIC3.86□□□□□ -1.79
SSX4O60224 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SSX4O60224 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms