Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.84□□□□□ -1.79
CLDN3O15551 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.84□□□□□ -1.79
CLDN3O15551 U3.44-201ENST00000458938 192 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 AC084357.1-201ENST00000473404 255 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 RN7SL293P-201ENST00000481765 281 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 RPS3AP50-201ENST00000487064 803 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 AC078918.1-201ENST00000498515 228 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 AC021146.1-201ENST00000511202 716 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.84□□□□□ -1.79
CLDN3O15551 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN3O15551 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN3O15551 CCNG2P1-201ENST00000549521 1000 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 CYP2C60P-201ENST00000566088 139 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.84□□□□□ -1.79
CLDN3O15551 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.84□□□□□ -1.79
CLDN3O15551 AC010928.3-201ENST00000587712 541 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 AC018754.1-201ENST00000607486 925 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 AC068620.4-201ENST00000636730 1182 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.84□□□□□ -1.79
CLDN3O15551 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CLDN3O15551 AC073055.1-201ENST00000456901 1621 ntBASIC3.84□□□□□ -1.8
CLDN3O15551 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CLDN3O15551 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.84□□□□□ -1.8
CLDN3O15551 USP8P1-201ENST00000494673 3183 ntBASIC3.84□□□□□ -1.8
CLDN3O15551 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN3O15551 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN3O15551 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN3O15551 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN3O15551 MIR7-3-201ENST00000384898 110 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 AC245052.5-201ENST00000416320 649 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN3O15551 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN3O15551 YME1L1P1-201ENST00000429435 297 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 ATP5JP1-201ENST00000431631 322 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN3O15551 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN3O15551 AP000893.1-201ENST00000474462 794 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN3O15551 AC023141.12-201ENST00000512399 199 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 HIGD1AP6-201ENST00000521833 279 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN3O15551 IGJP1-201ENST00000522682 475 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN3O15551 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.83□□□□□ -1.8
CLDN3O15551 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN3O15551 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN3O15551 AC053481.3-201ENST00000577881 843 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN3O15551 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN3O15551 HSPE1P14-201ENST00000605812 302 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 AC103710.3-201ENST00000608157 948 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 AC019176.2-201ENST00000611579 315 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 AC106730.3-201ENST00000624568 641 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN3O15551 RPS4XP5-202ENST00000449995 1334 ntBASIC3.83□□□□□ -1.8
CLDN3O15551 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN3O15551 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN3O15551 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN3O15551 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN3O15551 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN3O15551 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN3O15551 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN3O15551 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN3O15551 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN3O15551 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN3O15551 PABPC1P7-201ENST00000413177 1513 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN3O15551 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN3O15551 AL157700.1-201ENST00000561973 1432 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 AC025263.3-201ENST00000622965 1396 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 SEPT7P7-201ENST00000420492 1301 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN3O15551 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN3O15551 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN3O15551 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN3O15551 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN3O15551 AC074367.1-201ENST00000438685 1125 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 NPM1P49-201ENST00000448027 714 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN3O15551 AL096803.2-201ENST00000450032 677 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 RPL7L1P8-201ENST00000469911 741 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 RPS4XP6-201ENST00000477670 797 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN3O15551 AC005921.1-201ENST00000510589 286 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 AP000619.3-201ENST00000535634 1127 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 AC011611.5-201ENST00000552477 578 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN3O15551 OR4G1P-201ENST00000588632 938 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 AC007687.1-201ENST00000602704 304 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 MIR8084-201ENST00000614105 89 ntBASIC3.82□□□□□ -1.8
CLDN3O15551 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CLDN3O15551 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CLDN3O15551 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN3O15551 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN3O15551 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN3O15551 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN3O15551 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN3O15551 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms