Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.04□□□□□ -1.76
O00370 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.04□□□□□ -1.76
O00370 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
O00370 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
O00370 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
O00370 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
O00370 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
O00370 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
O00370 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
O00370 RNU6-236P-201ENST00000363886 106 ntBASIC4.03□□□□□ -1.76
O00370 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
O00370 SOD2P1-201ENST00000396543 562 ntBASIC4.03□□□□□ -1.76
O00370 HLFP1-201ENST00000402375 499 ntBASIC4.03□□□□□ -1.76
O00370 SFR1P1-201ENST00000403720 688 ntBASIC4.03□□□□□ -1.76
O00370 AL355379.1-201ENST00000405542 640 ntBASIC4.03□□□□□ -1.76
O00370 RPS7P9-201ENST00000414704 586 ntBASIC4.03□□□□□ -1.76
O00370 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.03□□□□□ -1.76
O00370 AC092648.1-201ENST00000425870 423 ntBASIC4.03□□□□□ -1.76
O00370 AL009174.1-201ENST00000426577 416 ntBASIC4.03□□□□□ -1.76
O00370 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.03□□□□□ -1.76
O00370 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.03□□□□□ -1.76
O00370 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.03□□□□□ -1.76
O00370 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.03□□□□□ -1.76
O00370 AC122718.1-201ENST00000439448 744 ntBASIC4.03□□□□□ -1.76
O00370 EXTL2P1-201ENST00000446218 416 ntBASIC4.03□□□□□ -1.76
O00370 HMGN2P21-201ENST00000447764 270 ntBASIC4.03□□□□□ -1.76
O00370 FAM133DP-201ENST00000464802 691 ntBASIC4.03□□□□□ -1.76
O00370 PRDX3P4-201ENST00000470828 747 ntBASIC4.03□□□□□ -1.76
O00370 GAPDHP36-201ENST00000480688 918 ntBASIC4.03□□□□□ -1.76
O00370 AC069528.1-202ENST00000482888 637 ntBASIC4.03□□□□□ -1.76
O00370 TRBV12-2-201ENST00000489763 344 ntBASIC4.03□□□□□ -1.76
O00370 RPL5P23-201ENST00000496040 868 ntBASIC4.03□□□□□ -1.76
O00370 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
O00370 AC108941.1-201ENST00000502853 530 ntBASIC4.03□□□□□ -1.76
O00370 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
O00370 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.03□□□□□ -1.76
O00370 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
O00370 NPM1P41-201ENST00000512920 831 ntBASIC4.03□□□□□ -1.76
O00370 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
O00370 RNA5SP164-201ENST00000516533 110 ntBASIC4.03□□□□□ -1.76
O00370 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.03□□□□□ -1.76
O00370 AC023632.1-201ENST00000518463 375 ntBASIC4.03□□□□□ -1.76
O00370 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.03□□□□□ -1.76
O00370 MTCO3P15-201ENST00000526563 574 ntBASIC4.03□□□□□ -1.76
O00370 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.03□□□□□ -1.76
O00370 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.03□□□□□ -1.76
O00370 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.03□□□□□ -1.76
O00370 MIR5685-201ENST00000579080 79 ntBASIC4.03□□□□□ -1.76
O00370 BPTFP1-201ENST00000579209 492 ntBASIC4.03□□□□□ -1.76
O00370 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.03□□□□□ -1.76
O00370 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.03□□□□□ -1.76
O00370 SNORA62.6-201ENST00000606322 83 ntBASIC4.03□□□□□ -1.76
O00370 VN1R7P-201ENST00000619242 903 ntBASIC4.03□□□□□ -1.76
O00370 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.03□□□□□ -1.76
O00370 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.03□□□□□ -1.76
O00370 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
O00370 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.02□□□□□ -1.77
O00370 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
O00370 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.02□□□□□ -1.77
O00370 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
O00370 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
O00370 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.02□□□□□ -1.77
O00370 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
O00370 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
O00370 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
O00370 Y_RNA.472-201ENST00000384322 102 ntBASIC4.02□□□□□ -1.77
O00370 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.02□□□□□ -1.77
O00370 AC127526.1-201ENST00000417526 366 ntBASIC4.02□□□□□ -1.77
O00370 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.02□□□□□ -1.77
O00370 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.02□□□□□ -1.77
O00370 RPL7P2-201ENST00000427639 268 ntBASIC4.02□□□□□ -1.77
O00370 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.02□□□□□ -1.77
O00370 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.02□□□□□ -1.77
O00370 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.02□□□□□ -1.77
O00370 OR10R1P-201ENST00000441524 1141 ntBASIC4.02□□□□□ -1.77
O00370 MTCYBP42-201ENST00000444653 1130 ntBASIC4.02□□□□□ -1.77
O00370 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.02□□□□□ -1.77
O00370 DNAJC19P1-201ENST00000455312 319 ntBASIC4.02□□□□□ -1.77
O00370 AC126121.1-201ENST00000482313 553 ntBASIC4.02□□□□□ -1.77
O00370 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
O00370 AC078817.1-201ENST00000492623 435 ntBASIC4.02□□□□□ -1.77
O00370 RPL21P131-201ENST00000497298 483 ntBASIC4.02□□□□□ -1.77
O00370 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
O00370 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.02□□□□□ -1.77
O00370 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
O00370 AC109471.1-201ENST00000511631 612 ntBASIC4.02□□□□□ -1.77
O00370 AC093853.1-201ENST00000515689 483 ntBASIC4.02□□□□□ -1.77
O00370 RNU6-202P-201ENST00000515998 96 ntBASIC4.02□□□□□ -1.77
O00370 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.02□□□□□ -1.77
O00370 AL132857.1-201ENST00000555180 708 ntBASIC4.02□□□□□ -1.77
O00370 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.02□□□□□ -1.77
O00370 AC099489.2-201ENST00000574976 260 ntBASIC4.02□□□□□ -1.77
O00370 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.02□□□□□ -1.77
O00370 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
O00370 BRDTP1-201ENST00000605735 677 ntBASIC4.02□□□□□ -1.77
O00370 AC009974.1-201ENST00000608881 455 ntBASIC4.02□□□□□ -1.77
O00370 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
O00370 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
O00370 AC123767.1-202ENST00000620407 817 ntBASIC4.02□□□□□ -1.77
O00370 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms